Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
MS4A4EQ96PG1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MS4A4EQ96PG1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
MS4A4EQ96PG1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.24■□□□□ 0.83
MS4A4EQ96PG1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.24■□□□□ 0.83
MS4A4EQ96PG1 MIR4767-201ENST00000582827 78 ntBASIC20.24■□□□□ 0.83
MS4A4EQ96PG1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MS4A4EQ96PG1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MS4A4EQ96PG1 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
MS4A4EQ96PG1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
MS4A4EQ96PG1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
MS4A4EQ96PG1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MS4A4EQ96PG1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.23■□□□□ 0.83
MS4A4EQ96PG1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.23■□□□□ 0.83
MS4A4EQ96PG1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MS4A4EQ96PG1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MS4A4EQ96PG1 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
MS4A4EQ96PG1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MS4A4EQ96PG1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
MS4A4EQ96PG1 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.23■□□□□ 0.83
MS4A4EQ96PG1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.23■□□□□ 0.83
MS4A4EQ96PG1 AL136162.1-201ENST00000607711 1078 ntBASIC20.23■□□□□ 0.83
MS4A4EQ96PG1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MS4A4EQ96PG1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
MS4A4EQ96PG1 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MS4A4EQ96PG1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MS4A4EQ96PG1 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MS4A4EQ96PG1 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MS4A4EQ96PG1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MS4A4EQ96PG1 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
MS4A4EQ96PG1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MS4A4EQ96PG1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
MS4A4EQ96PG1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.22■□□□□ 0.83
MS4A4EQ96PG1 AP005435.1-201ENST00000529293 1178 ntBASIC20.22■□□□□ 0.83
MS4A4EQ96PG1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MS4A4EQ96PG1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.22■□□□□ 0.83
MS4A4EQ96PG1 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
MS4A4EQ96PG1 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MS4A4EQ96PG1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
MS4A4EQ96PG1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MS4A4EQ96PG1 AC135279.3-201ENST00000610945 1311 ntBASIC20.22■□□□□ 0.83
MS4A4EQ96PG1 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
MS4A4EQ96PG1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MS4A4EQ96PG1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
MS4A4EQ96PG1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MS4A4EQ96PG1 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
MS4A4EQ96PG1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.21■□□□□ 0.83
MS4A4EQ96PG1 OR7E47P-201ENST00000546390 1422 ntBASIC20.21■□□□□ 0.83
MS4A4EQ96PG1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.21■□□□□ 0.83
MS4A4EQ96PG1 AC024257.2-201ENST00000549699 147 ntBASIC20.21■□□□□ 0.83
MS4A4EQ96PG1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.21■□□□□ 0.83
MS4A4EQ96PG1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.21■□□□□ 0.83
MS4A4EQ96PG1 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.21■□□□□ 0.83
MS4A4EQ96PG1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.2■□□□□ 0.83
MS4A4EQ96PG1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
MS4A4EQ96PG1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
MS4A4EQ96PG1 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MS4A4EQ96PG1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.2■□□□□ 0.82
MS4A4EQ96PG1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MS4A4EQ96PG1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.2■□□□□ 0.82
MS4A4EQ96PG1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
MS4A4EQ96PG1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
MS4A4EQ96PG1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
MS4A4EQ96PG1 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MS4A4EQ96PG1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MS4A4EQ96PG1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MS4A4EQ96PG1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MS4A4EQ96PG1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MS4A4EQ96PG1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MS4A4EQ96PG1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.2■□□□□ 0.82
MS4A4EQ96PG1 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MS4A4EQ96PG1 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
MS4A4EQ96PG1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MS4A4EQ96PG1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MS4A4EQ96PG1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.19■□□□□ 0.82
MS4A4EQ96PG1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.19■□□□□ 0.82
MS4A4EQ96PG1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MS4A4EQ96PG1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
MS4A4EQ96PG1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MS4A4EQ96PG1 OXCT2P1-201ENST00000447263 1535 ntBASIC20.19■□□□□ 0.82
MS4A4EQ96PG1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
MS4A4EQ96PG1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MS4A4EQ96PG1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.19■□□□□ 0.82
MS4A4EQ96PG1 BX842568.3-201ENST00000418104 571 ntBASIC20.19■□□□□ 0.82
MS4A4EQ96PG1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.19■□□□□ 0.82
MS4A4EQ96PG1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.19■□□□□ 0.82
MS4A4EQ96PG1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
MS4A4EQ96PG1 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
MS4A4EQ96PG1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MS4A4EQ96PG1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MS4A4EQ96PG1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
MS4A4EQ96PG1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MS4A4EQ96PG1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MS4A4EQ96PG1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MS4A4EQ96PG1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MS4A4EQ96PG1 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MS4A4EQ96PG1 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.18■□□□□ 0.82
MS4A4EQ96PG1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MS4A4EQ96PG1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MS4A4EQ96PG1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms