Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
MBD3L1Q8WWY6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MBD3L1Q8WWY6 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
MBD3L1Q8WWY6 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MBD3L1Q8WWY6 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MBD3L1Q8WWY6 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17■□□□□ 0.31
MBD3L1Q8WWY6 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
MBD3L1Q8WWY6 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17■□□□□ 0.31
MBD3L1Q8WWY6 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MBD3L1Q8WWY6 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17■□□□□ 0.31
MBD3L1Q8WWY6 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MBD3L1Q8WWY6 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
MBD3L1Q8WWY6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17■□□□□ 0.31
MBD3L1Q8WWY6 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC17■□□□□ 0.31
MBD3L1Q8WWY6 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC17■□□□□ 0.31
MBD3L1Q8WWY6 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17■□□□□ 0.31
MBD3L1Q8WWY6 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC17■□□□□ 0.31
MBD3L1Q8WWY6 CA15P2-201ENST00000611168 834 ntBASIC17■□□□□ 0.31
MBD3L1Q8WWY6 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17■□□□□ 0.31
MBD3L1Q8WWY6 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MBD3L1Q8WWY6 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17■□□□□ 0.31
MBD3L1Q8WWY6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
MBD3L1Q8WWY6 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
MBD3L1Q8WWY6 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MBD3L1Q8WWY6 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
MBD3L1Q8WWY6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
MBD3L1Q8WWY6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MBD3L1Q8WWY6 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MBD3L1Q8WWY6 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MBD3L1Q8WWY6 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MBD3L1Q8WWY6 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC16.99■□□□□ 0.31
MBD3L1Q8WWY6 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MBD3L1Q8WWY6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MBD3L1Q8WWY6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
MBD3L1Q8WWY6 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MBD3L1Q8WWY6 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
MBD3L1Q8WWY6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC16.99■□□□□ 0.31
MBD3L1Q8WWY6 AC018755.3-202ENST00000596210 929 ntBASIC16.99■□□□□ 0.31
MBD3L1Q8WWY6 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
MBD3L1Q8WWY6 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
MBD3L1Q8WWY6 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.99■□□□□ 0.31
MBD3L1Q8WWY6 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MBD3L1Q8WWY6 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
MBD3L1Q8WWY6 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC16.99■□□□□ 0.31
MBD3L1Q8WWY6 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC16.99■□□□□ 0.31
MBD3L1Q8WWY6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC16.99■□□□□ 0.31
MBD3L1Q8WWY6 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MBD3L1Q8WWY6 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MBD3L1Q8WWY6 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
MBD3L1Q8WWY6 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MBD3L1Q8WWY6 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
MBD3L1Q8WWY6 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MBD3L1Q8WWY6 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MBD3L1Q8WWY6 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MBD3L1Q8WWY6 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
MBD3L1Q8WWY6 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
MBD3L1Q8WWY6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MBD3L1Q8WWY6 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.98■□□□□ 0.31
MBD3L1Q8WWY6 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
MBD3L1Q8WWY6 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
MBD3L1Q8WWY6 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MBD3L1Q8WWY6 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MBD3L1Q8WWY6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC16.98■□□□□ 0.31
MBD3L1Q8WWY6 AC009831.1-201ENST00000580420 1582 ntBASIC16.98■□□□□ 0.31
MBD3L1Q8WWY6 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
MBD3L1Q8WWY6 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MBD3L1Q8WWY6 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
MBD3L1Q8WWY6 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MBD3L1Q8WWY6 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC16.97■□□□□ 0.31
MBD3L1Q8WWY6 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MBD3L1Q8WWY6 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
MBD3L1Q8WWY6 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
MBD3L1Q8WWY6 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
MBD3L1Q8WWY6 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MBD3L1Q8WWY6 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MBD3L1Q8WWY6 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MBD3L1Q8WWY6 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MBD3L1Q8WWY6 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MBD3L1Q8WWY6 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
MBD3L1Q8WWY6 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MBD3L1Q8WWY6 IDNK-203ENST00000405990 629 ntTSL 2 BASIC16.96■□□□□ 0.31
MBD3L1Q8WWY6 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC16.96■□□□□ 0.31
MBD3L1Q8WWY6 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
MBD3L1Q8WWY6 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC16.96■□□□□ 0.31
MBD3L1Q8WWY6 AC133552.2-201ENST00000619106 1032 ntBASIC16.96■□□□□ 0.31
MBD3L1Q8WWY6 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC16.96■□□□□ 0.31
MBD3L1Q8WWY6 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
MBD3L1Q8WWY6 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
MBD3L1Q8WWY6 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
MBD3L1Q8WWY6 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
MBD3L1Q8WWY6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.96■□□□□ 0.31
MBD3L1Q8WWY6 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MBD3L1Q8WWY6 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.96■□□□□ 0.3
MBD3L1Q8WWY6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
MBD3L1Q8WWY6 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
MBD3L1Q8WWY6 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
MBD3L1Q8WWY6 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
MBD3L1Q8WWY6 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
MBD3L1Q8WWY6 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
MBD3L1Q8WWY6 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms