Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM11BQ8TCY0 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM11BQ8TCY0 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM11BQ8TCY0 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM11BQ8TCY0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM11BQ8TCY0 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
SMIM11BQ8TCY0 RPS2P7-201ENST00000447334 885 ntBASIC14.06□□□□□ -0.16
SMIM11BQ8TCY0 ZNRF2P2-203ENST00000454624 420 ntBASIC14.06□□□□□ -0.16
SMIM11BQ8TCY0 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC14.06□□□□□ -0.16
SMIM11BQ8TCY0 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SMIM11BQ8TCY0 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM11BQ8TCY0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC14.06□□□□□ -0.16
SMIM11BQ8TCY0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM11BQ8TCY0 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM11BQ8TCY0 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM11BQ8TCY0 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM11BQ8TCY0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM11BQ8TCY0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM11BQ8TCY0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SMIM11BQ8TCY0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SMIM11BQ8TCY0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC14.06□□□□□ -0.16
SMIM11BQ8TCY0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SMIM11BQ8TCY0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
SMIM11BQ8TCY0 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM11BQ8TCY0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM11BQ8TCY0 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SMIM11BQ8TCY0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM11BQ8TCY0 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM11BQ8TCY0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM11BQ8TCY0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SMIM11BQ8TCY0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM11BQ8TCY0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM11BQ8TCY0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC14.05□□□□□ -0.16
SMIM11BQ8TCY0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC14.05□□□□□ -0.16
SMIM11BQ8TCY0 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM11BQ8TCY0 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM11BQ8TCY0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC14.05□□□□□ -0.16
SMIM11BQ8TCY0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC14.05□□□□□ -0.16
SMIM11BQ8TCY0 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
SMIM11BQ8TCY0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC14.05□□□□□ -0.16
SMIM11BQ8TCY0 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM11BQ8TCY0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC14.05□□□□□ -0.16
SMIM11BQ8TCY0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC14.05□□□□□ -0.16
SMIM11BQ8TCY0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC14.04□□□□□ -0.16
SMIM11BQ8TCY0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SMIM11BQ8TCY0 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM11BQ8TCY0 ME2-206ENST00000638410 2289 ntTSL 5 BASIC14.04□□□□□ -0.16
SMIM11BQ8TCY0 ME2-210ENST00000639255 2262 ntTSL 5 BASIC14.04□□□□□ -0.16
SMIM11BQ8TCY0 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM11BQ8TCY0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM11BQ8TCY0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC14.04□□□□□ -0.16
SMIM11BQ8TCY0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SMIM11BQ8TCY0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC14.04□□□□□ -0.16
SMIM11BQ8TCY0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC14.03□□□□□ -0.16
SMIM11BQ8TCY0 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM11BQ8TCY0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM11BQ8TCY0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM11BQ8TCY0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM11BQ8TCY0 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SMIM11BQ8TCY0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM11BQ8TCY0 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM11BQ8TCY0 MIR3648-2-201ENST00000581792 180 ntBASIC14.03□□□□□ -0.16
SMIM11BQ8TCY0 MIR3648-1-201ENST00000615959 180 ntBASIC14.03□□□□□ -0.16
SMIM11BQ8TCY0 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC14.03□□□□□ -0.16
SMIM11BQ8TCY0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM11BQ8TCY0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC14.03□□□□□ -0.16
SMIM11BQ8TCY0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC14.03□□□□□ -0.16
SMIM11BQ8TCY0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SMIM11BQ8TCY0 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM11BQ8TCY0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM11BQ8TCY0 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC14.03□□□□□ -0.16
SMIM11BQ8TCY0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM11BQ8TCY0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM11BQ8TCY0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM11BQ8TCY0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
SMIM11BQ8TCY0 AL391422.3-201ENST00000603791 2761 ntBASIC14.02□□□□□ -0.16
SMIM11BQ8TCY0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SMIM11BQ8TCY0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
SMIM11BQ8TCY0 LINC01960-201ENST00000563759 1884 ntBASIC14.02□□□□□ -0.16
SMIM11BQ8TCY0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SMIM11BQ8TCY0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
SMIM11BQ8TCY0 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SMIM11BQ8TCY0 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMIM11BQ8TCY0 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
SMIM11BQ8TCY0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC14.02□□□□□ -0.17
SMIM11BQ8TCY0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMIM11BQ8TCY0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC14.02□□□□□ -0.17
SMIM11BQ8TCY0 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMIM11BQ8TCY0 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SMIM11BQ8TCY0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC14.02□□□□□ -0.17
SMIM11BQ8TCY0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SMIM11BQ8TCY0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMIM11BQ8TCY0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC14.02□□□□□ -0.17
SMIM11BQ8TCY0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SMIM11BQ8TCY0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SMIM11BQ8TCY0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMIM11BQ8TCY0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SMIM11BQ8TCY0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM11BQ8TCY0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC14.01□□□□□ -0.17
SMIM11BQ8TCY0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms