Protein–RNA interactions for Protein: Q8N4B4

FBXO39, F-box only protein 39, humanhuman

Predictions only

Length 442 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO39Q8N4B4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
FBXO39Q8N4B4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.61■■□□□ 1.05
FBXO39Q8N4B4 pRNA.6-201ENST00000610482 90 ntBASIC21.61■■□□□ 1.05
FBXO39Q8N4B4 pRNA.5-201ENST00000612139 90 ntBASIC21.61■■□□□ 1.05
FBXO39Q8N4B4 pRNA.11-201ENST00000618423 90 ntBASIC21.61■■□□□ 1.05
FBXO39Q8N4B4 pRNA.13-201ENST00000619112 90 ntBASIC21.61■■□□□ 1.05
FBXO39Q8N4B4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
FBXO39Q8N4B4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
FBXO39Q8N4B4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
FBXO39Q8N4B4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
FBXO39Q8N4B4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.6■■□□□ 1.05
FBXO39Q8N4B4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
FBXO39Q8N4B4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
FBXO39Q8N4B4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.6■■□□□ 1.05
FBXO39Q8N4B4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
FBXO39Q8N4B4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
FBXO39Q8N4B4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
FBXO39Q8N4B4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FBXO39Q8N4B4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FBXO39Q8N4B4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
FBXO39Q8N4B4 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
FBXO39Q8N4B4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
FBXO39Q8N4B4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.59■■□□□ 1.05
FBXO39Q8N4B4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
FBXO39Q8N4B4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FBXO39Q8N4B4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FBXO39Q8N4B4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
FBXO39Q8N4B4 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.59■■□□□ 1.05
FBXO39Q8N4B4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
FBXO39Q8N4B4 AC080038.3-201ENST00000623346 1952 ntBASIC21.59■■□□□ 1.05
FBXO39Q8N4B4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
FBXO39Q8N4B4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
FBXO39Q8N4B4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
FBXO39Q8N4B4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
FBXO39Q8N4B4 AC139530.1-201ENST00000575312 1977 ntBASIC21.58■■□□□ 1.05
FBXO39Q8N4B4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
FBXO39Q8N4B4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.58■■□□□ 1.05
FBXO39Q8N4B4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.58■■□□□ 1.05
FBXO39Q8N4B4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
FBXO39Q8N4B4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
FBXO39Q8N4B4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
FBXO39Q8N4B4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
FBXO39Q8N4B4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
FBXO39Q8N4B4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.58■■□□□ 1.04
FBXO39Q8N4B4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
FBXO39Q8N4B4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
FBXO39Q8N4B4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
FBXO39Q8N4B4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
FBXO39Q8N4B4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
FBXO39Q8N4B4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
FBXO39Q8N4B4 AC034268.1-201ENST00000441047 882 ntBASIC21.57■■□□□ 1.04
FBXO39Q8N4B4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
FBXO39Q8N4B4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
FBXO39Q8N4B4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
FBXO39Q8N4B4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
FBXO39Q8N4B4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.56■■□□□ 1.04
FBXO39Q8N4B4 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.56■■□□□ 1.04
FBXO39Q8N4B4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
FBXO39Q8N4B4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
FBXO39Q8N4B4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.56■■□□□ 1.04
FBXO39Q8N4B4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
FBXO39Q8N4B4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
FBXO39Q8N4B4 AC092053.2-201ENST00000640557 1818 ntBASIC21.56■■□□□ 1.04
FBXO39Q8N4B4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
FBXO39Q8N4B4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
FBXO39Q8N4B4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
FBXO39Q8N4B4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
FBXO39Q8N4B4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
FBXO39Q8N4B4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FBXO39Q8N4B4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.55■■□□□ 1.04
FBXO39Q8N4B4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.55■■□□□ 1.04
FBXO39Q8N4B4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
FBXO39Q8N4B4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FBXO39Q8N4B4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FBXO39Q8N4B4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.55■■□□□ 1.04
FBXO39Q8N4B4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.55■■□□□ 1.04
FBXO39Q8N4B4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
FBXO39Q8N4B4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
FBXO39Q8N4B4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
FBXO39Q8N4B4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.55■■□□□ 1.04
FBXO39Q8N4B4 LINC01960-201ENST00000563759 1884 ntBASIC21.55■■□□□ 1.04
FBXO39Q8N4B4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
FBXO39Q8N4B4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
FBXO39Q8N4B4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FBXO39Q8N4B4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FBXO39Q8N4B4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FBXO39Q8N4B4 AC004687.1-201ENST00000579003 1625 ntBASIC21.55■■□□□ 1.04
FBXO39Q8N4B4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.55■■□□□ 1.04
FBXO39Q8N4B4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
FBXO39Q8N4B4 TSPY26P-201ENST00000476365 1326 ntBASIC21.55■■□□□ 1.04
FBXO39Q8N4B4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.54■■□□□ 1.04
FBXO39Q8N4B4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
FBXO39Q8N4B4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FBXO39Q8N4B4 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
FBXO39Q8N4B4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
FBXO39Q8N4B4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FBXO39Q8N4B4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
FBXO39Q8N4B4 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
FBXO39Q8N4B4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
FBXO39Q8N4B4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms