Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
DHX40Q8IX18 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.14■■□□□ 1.45
DHX40Q8IX18 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
DHX40Q8IX18 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
DHX40Q8IX18 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
DHX40Q8IX18 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
DHX40Q8IX18 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
DHX40Q8IX18 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC24.13■■□□□ 1.45
DHX40Q8IX18 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC24.13■■□□□ 1.45
DHX40Q8IX18 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
DHX40Q8IX18 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
DHX40Q8IX18 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
DHX40Q8IX18 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
DHX40Q8IX18 FEM1AP4-201ENST00000443167 1987 ntBASIC24.13■■□□□ 1.45
DHX40Q8IX18 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC24.13■■□□□ 1.45
DHX40Q8IX18 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
DHX40Q8IX18 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
DHX40Q8IX18 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
DHX40Q8IX18 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
DHX40Q8IX18 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
DHX40Q8IX18 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
DHX40Q8IX18 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
DHX40Q8IX18 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC24.12■■□□□ 1.45
DHX40Q8IX18 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC24.12■■□□□ 1.45
DHX40Q8IX18 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC24.12■■□□□ 1.45
DHX40Q8IX18 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
DHX40Q8IX18 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
DHX40Q8IX18 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC24.12■■□□□ 1.45
DHX40Q8IX18 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
DHX40Q8IX18 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
DHX40Q8IX18 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
DHX40Q8IX18 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
DHX40Q8IX18 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
DHX40Q8IX18 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
DHX40Q8IX18 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
DHX40Q8IX18 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
DHX40Q8IX18 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
DHX40Q8IX18 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
DHX40Q8IX18 AC239859.2-201ENST00000444165 318 ntBASIC24.11■■□□□ 1.45
DHX40Q8IX18 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
DHX40Q8IX18 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC24.11■■□□□ 1.45
DHX40Q8IX18 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC24.11■■□□□ 1.45
DHX40Q8IX18 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC24.11■■□□□ 1.45
DHX40Q8IX18 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
DHX40Q8IX18 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
DHX40Q8IX18 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
DHX40Q8IX18 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC24.1■■□□□ 1.45
DHX40Q8IX18 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC24.1■■□□□ 1.45
DHX40Q8IX18 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.1■■□□□ 1.45
DHX40Q8IX18 GUSBP5-201ENST00000418136 578 ntBASIC24.1■■□□□ 1.45
DHX40Q8IX18 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.1■■□□□ 1.45
DHX40Q8IX18 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC24.1■■□□□ 1.45
DHX40Q8IX18 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
DHX40Q8IX18 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
DHX40Q8IX18 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
DHX40Q8IX18 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
DHX40Q8IX18 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
DHX40Q8IX18 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
DHX40Q8IX18 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC24.09■■□□□ 1.45
DHX40Q8IX18 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC24.09■■□□□ 1.45
DHX40Q8IX18 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
DHX40Q8IX18 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
DHX40Q8IX18 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.09■■□□□ 1.45
DHX40Q8IX18 AC026471.6-201ENST00000622954 1905 ntBASIC24.09■■□□□ 1.45
DHX40Q8IX18 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
DHX40Q8IX18 C17orf82-201ENST00000623772 1530 ntBASIC24.09■■□□□ 1.45
DHX40Q8IX18 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC24.09■■□□□ 1.45
DHX40Q8IX18 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC24.08■■□□□ 1.45
DHX40Q8IX18 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
DHX40Q8IX18 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
DHX40Q8IX18 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
DHX40Q8IX18 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC24.08■■□□□ 1.45
DHX40Q8IX18 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC24.08■■□□□ 1.45
DHX40Q8IX18 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
DHX40Q8IX18 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
DHX40Q8IX18 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.08■■□□□ 1.45
DHX40Q8IX18 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC24.08■■□□□ 1.45
DHX40Q8IX18 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC24.08■■□□□ 1.45
DHX40Q8IX18 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
DHX40Q8IX18 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
DHX40Q8IX18 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC24.08■■□□□ 1.45
DHX40Q8IX18 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.44
DHX40Q8IX18 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
DHX40Q8IX18 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
DHX40Q8IX18 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
DHX40Q8IX18 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.07■■□□□ 1.44
DHX40Q8IX18 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
DHX40Q8IX18 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC24.07■■□□□ 1.44
DHX40Q8IX18 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC24.07■■□□□ 1.44
DHX40Q8IX18 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC24.07■■□□□ 1.44
DHX40Q8IX18 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
DHX40Q8IX18 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
DHX40Q8IX18 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
DHX40Q8IX18 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
DHX40Q8IX18 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC24.06■■□□□ 1.44
DHX40Q8IX18 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
DHX40Q8IX18 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
DHX40Q8IX18 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
DHX40Q8IX18 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC24.05■■□□□ 1.44
DHX40Q8IX18 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC24.05■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms