Protein–RNA interactions for Protein: Q4G0N8

SLC9C1, Sodium/hydrogen exchanger 10, humanhuman

Predictions only

Length 1,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9C1Q4G0N8 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC25.12■■□□□ 1.61
SLC9C1Q4G0N8 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SLC9C1Q4G0N8 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
SLC9C1Q4G0N8 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SLC9C1Q4G0N8 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC25.12■■□□□ 1.61
SLC9C1Q4G0N8 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SLC9C1Q4G0N8 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
SLC9C1Q4G0N8 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
SLC9C1Q4G0N8 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC25.11■■□□□ 1.61
SLC9C1Q4G0N8 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SLC9C1Q4G0N8 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
SLC9C1Q4G0N8 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
SLC9C1Q4G0N8 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC25.11■■□□□ 1.61
SLC9C1Q4G0N8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC25.11■■□□□ 1.61
SLC9C1Q4G0N8 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
SLC9C1Q4G0N8 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
SLC9C1Q4G0N8 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SLC9C1Q4G0N8 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC25.11■■□□□ 1.61
SLC9C1Q4G0N8 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SLC9C1Q4G0N8 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
SLC9C1Q4G0N8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SLC9C1Q4G0N8 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SLC9C1Q4G0N8 AC007322.1-201ENST00000426983 750 ntBASIC25.1■■□□□ 1.61
SLC9C1Q4G0N8 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC25.1■■□□□ 1.61
SLC9C1Q4G0N8 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
SLC9C1Q4G0N8 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
SLC9C1Q4G0N8 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SLC9C1Q4G0N8 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC25.1■■□□□ 1.61
SLC9C1Q4G0N8 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SLC9C1Q4G0N8 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SLC9C1Q4G0N8 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SLC9C1Q4G0N8 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SLC9C1Q4G0N8 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SLC9C1Q4G0N8 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SLC9C1Q4G0N8 AC079140.4-201ENST00000507448 529 ntBASIC25.09■■□□□ 1.61
SLC9C1Q4G0N8 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC25.09■■□□□ 1.61
SLC9C1Q4G0N8 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
SLC9C1Q4G0N8 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC25.09■■□□□ 1.61
SLC9C1Q4G0N8 AC133041.1-202ENST00000642053 222 ntBASIC25.09■■□□□ 1.61
SLC9C1Q4G0N8 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SLC9C1Q4G0N8 CASK-201ENST00000378154 2494 ntTSL 5 BASIC25.09■■□□□ 1.61
SLC9C1Q4G0N8 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
SLC9C1Q4G0N8 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
SLC9C1Q4G0N8 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SLC9C1Q4G0N8 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SLC9C1Q4G0N8 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
SLC9C1Q4G0N8 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
SLC9C1Q4G0N8 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SLC9C1Q4G0N8 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SLC9C1Q4G0N8 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC25.08■■□□□ 1.61
SLC9C1Q4G0N8 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC25.07■■□□□ 1.6
SLC9C1Q4G0N8 ABCB10P4-201ENST00000566803 2184 ntBASIC25.07■■□□□ 1.6
SLC9C1Q4G0N8 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SLC9C1Q4G0N8 KRT18P29-201ENST00000397031 1267 ntBASIC25.07■■□□□ 1.6
SLC9C1Q4G0N8 POU5F1P3-201ENST00000428824 1078 ntBASIC25.07■■□□□ 1.6
SLC9C1Q4G0N8 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC25.07■■□□□ 1.6
SLC9C1Q4G0N8 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC25.07■■□□□ 1.6
SLC9C1Q4G0N8 ITM2C-210ENST00000620962 501 ntBASIC25.07■■□□□ 1.6
SLC9C1Q4G0N8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SLC9C1Q4G0N8 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SLC9C1Q4G0N8 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SLC9C1Q4G0N8 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC25.07■■□□□ 1.6
SLC9C1Q4G0N8 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SLC9C1Q4G0N8 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SLC9C1Q4G0N8 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC25.06■■□□□ 1.6
SLC9C1Q4G0N8 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
SLC9C1Q4G0N8 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC25.06■■□□□ 1.6
SLC9C1Q4G0N8 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC25.06■■□□□ 1.6
SLC9C1Q4G0N8 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SLC9C1Q4G0N8 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SLC9C1Q4G0N8 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC25.05■■□□□ 1.6
SLC9C1Q4G0N8 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC25.05■■□□□ 1.6
SLC9C1Q4G0N8 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
SLC9C1Q4G0N8 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC25.05■■□□□ 1.6
SLC9C1Q4G0N8 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC25.05■■□□□ 1.6
SLC9C1Q4G0N8 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
SLC9C1Q4G0N8 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC25.05■■□□□ 1.6
SLC9C1Q4G0N8 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC25.05■■□□□ 1.6
SLC9C1Q4G0N8 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SLC9C1Q4G0N8 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SLC9C1Q4G0N8 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
SLC9C1Q4G0N8 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC25.04■■□□□ 1.6
SLC9C1Q4G0N8 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC25.04■■□□□ 1.6
SLC9C1Q4G0N8 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SLC9C1Q4G0N8 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC25.04■■□□□ 1.6
SLC9C1Q4G0N8 DUX4L16-201ENST00000555130 1264 ntBASIC25.04■■□□□ 1.6
SLC9C1Q4G0N8 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC25.04■■□□□ 1.6
SLC9C1Q4G0N8 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SLC9C1Q4G0N8 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SLC9C1Q4G0N8 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SLC9C1Q4G0N8 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
SLC9C1Q4G0N8 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
SLC9C1Q4G0N8 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC25.03■■□□□ 1.6
SLC9C1Q4G0N8 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC25.03■■□□□ 1.6
SLC9C1Q4G0N8 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SLC9C1Q4G0N8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
SLC9C1Q4G0N8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC25.03■■□□□ 1.6
SLC9C1Q4G0N8 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SLC9C1Q4G0N8 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SLC9C1Q4G0N8 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC25.03■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms