Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.06■□□□□ 0.64
LSM6P62312 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
LSM6P62312 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
LSM6P62312 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LSM6P62312 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
LSM6P62312 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LSM6P62312 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LSM6P62312 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.06■□□□□ 0.64
LSM6P62312 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
LSM6P62312 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LSM6P62312 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.05■□□□□ 0.64
LSM6P62312 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
LSM6P62312 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.05■□□□□ 0.64
LSM6P62312 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.05■□□□□ 0.64
LSM6P62312 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LSM6P62312 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.05■□□□□ 0.64
LSM6P62312 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
LSM6P62312 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
LSM6P62312 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
LSM6P62312 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LSM6P62312 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LSM6P62312 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
LSM6P62312 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
LSM6P62312 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.05■□□□□ 0.64
LSM6P62312 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LSM6P62312 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LSM6P62312 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.05■□□□□ 0.64
LSM6P62312 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
LSM6P62312 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
LSM6P62312 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
LSM6P62312 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSM6P62312 UNC93B3-201ENST00000308076 687 ntBASIC19.04■□□□□ 0.64
LSM6P62312 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.04■□□□□ 0.64
LSM6P62312 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSM6P62312 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
LSM6P62312 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.04■□□□□ 0.64
LSM6P62312 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LSM6P62312 SLC47A1P1-202ENST00000449666 945 ntBASIC19.04■□□□□ 0.64
LSM6P62312 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSM6P62312 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LSM6P62312 OR7E47P-201ENST00000546390 1422 ntBASIC19.04■□□□□ 0.64
LSM6P62312 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.04■□□□□ 0.64
LSM6P62312 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
LSM6P62312 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LSM6P62312 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSM6P62312 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSM6P62312 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSM6P62312 OXCT2P1-201ENST00000447263 1535 ntBASIC19.04■□□□□ 0.64
LSM6P62312 AC008406.3-201ENST00000620001 1374 ntBASIC19.04■□□□□ 0.64
LSM6P62312 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LSM6P62312 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.03■□□□□ 0.64
LSM6P62312 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LSM6P62312 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LSM6P62312 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LSM6P62312 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LSM6P62312 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LSM6P62312 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LSM6P62312 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LSM6P62312 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.03■□□□□ 0.64
LSM6P62312 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LSM6P62312 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LSM6P62312 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
LSM6P62312 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
LSM6P62312 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.02■□□□□ 0.64
LSM6P62312 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.02■□□□□ 0.64
LSM6P62312 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LSM6P62312 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LSM6P62312 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
LSM6P62312 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
LSM6P62312 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LSM6P62312 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
LSM6P62312 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LSM6P62312 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
LSM6P62312 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LSM6P62312 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
LSM6P62312 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LSM6P62312 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.02■□□□□ 0.64
LSM6P62312 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.02■□□□□ 0.64
LSM6P62312 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LSM6P62312 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LSM6P62312 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LSM6P62312 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
LSM6P62312 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LSM6P62312 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
LSM6P62312 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.01■□□□□ 0.63
LSM6P62312 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
LSM6P62312 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
LSM6P62312 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LSM6P62312 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.01■□□□□ 0.63
LSM6P62312 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.01■□□□□ 0.63
LSM6P62312 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LSM6P62312 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LSM6P62312 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LSM6P62312 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LSM6P62312 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19■□□□□ 0.63
LSM6P62312 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LSM6P62312 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LSM6P62312 BX842568.3-201ENST00000418104 571 ntBASIC19■□□□□ 0.63
LSM6P62312 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19■□□□□ 0.63
LSM6P62312 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms