Protein–RNA interactions for Protein: P21580

TNFAIP3, Tumor necrosis factor alpha-induced protein 3, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3P21580 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TNFAIP3P21580 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
TNFAIP3P21580 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
TNFAIP3P21580 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.19■■□□□ 1.3
TNFAIP3P21580 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.19■■□□□ 1.3
TNFAIP3P21580 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
TNFAIP3P21580 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
TNFAIP3P21580 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TNFAIP3P21580 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TNFAIP3P21580 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC23.19■■□□□ 1.3
TNFAIP3P21580 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.19■■□□□ 1.3
TNFAIP3P21580 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TNFAIP3P21580 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TNFAIP3P21580 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC23.19■■□□□ 1.3
TNFAIP3P21580 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TNFAIP3P21580 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TNFAIP3P21580 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TNFAIP3P21580 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TNFAIP3P21580 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TNFAIP3P21580 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TNFAIP3P21580 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
TNFAIP3P21580 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TNFAIP3P21580 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
TNFAIP3P21580 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TNFAIP3P21580 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TNFAIP3P21580 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TNFAIP3P21580 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC23.18■■□□□ 1.3
TNFAIP3P21580 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TNFAIP3P21580 AC007375.3-201ENST00000600936 2314 ntBASIC23.17■■□□□ 1.3
TNFAIP3P21580 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.17■■□□□ 1.3
TNFAIP3P21580 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TNFAIP3P21580 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TNFAIP3P21580 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TNFAIP3P21580 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TNFAIP3P21580 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.17■■□□□ 1.3
TNFAIP3P21580 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TNFAIP3P21580 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
TNFAIP3P21580 AC079089.2-201ENST00000531211 1277 ntBASIC23.17■■□□□ 1.3
TNFAIP3P21580 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.17■■□□□ 1.3
TNFAIP3P21580 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TNFAIP3P21580 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.17■■□□□ 1.3
TNFAIP3P21580 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TNFAIP3P21580 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TNFAIP3P21580 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TNFAIP3P21580 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.16■■□□□ 1.3
TNFAIP3P21580 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TNFAIP3P21580 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TNFAIP3P21580 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TNFAIP3P21580 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TNFAIP3P21580 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TNFAIP3P21580 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.16■■□□□ 1.3
TNFAIP3P21580 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.16■■□□□ 1.3
TNFAIP3P21580 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.16■■□□□ 1.3
TNFAIP3P21580 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TNFAIP3P21580 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.16■■□□□ 1.3
TNFAIP3P21580 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
TNFAIP3P21580 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.16■■□□□ 1.3
TNFAIP3P21580 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC23.16■■□□□ 1.3
TNFAIP3P21580 AC010542.4-201ENST00000563151 1910 ntBASIC23.16■■□□□ 1.3
TNFAIP3P21580 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
TNFAIP3P21580 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TNFAIP3P21580 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
TNFAIP3P21580 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TNFAIP3P21580 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TNFAIP3P21580 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TNFAIP3P21580 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
TNFAIP3P21580 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TNFAIP3P21580 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
TNFAIP3P21580 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TNFAIP3P21580 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TNFAIP3P21580 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.15■■□□□ 1.3
TNFAIP3P21580 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TNFAIP3P21580 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TNFAIP3P21580 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TNFAIP3P21580 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.14■■□□□ 1.3
TNFAIP3P21580 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.3
TNFAIP3P21580 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.3
TNFAIP3P21580 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.14■■□□□ 1.29
TNFAIP3P21580 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TNFAIP3P21580 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TNFAIP3P21580 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.14■■□□□ 1.29
TNFAIP3P21580 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.14■■□□□ 1.29
TNFAIP3P21580 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.14■■□□□ 1.29
TNFAIP3P21580 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.14■■□□□ 1.29
TNFAIP3P21580 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.14■■□□□ 1.29
TNFAIP3P21580 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TNFAIP3P21580 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TNFAIP3P21580 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
TNFAIP3P21580 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
TNFAIP3P21580 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TNFAIP3P21580 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TNFAIP3P21580 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
TNFAIP3P21580 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
TNFAIP3P21580 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
TNFAIP3P21580 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
TNFAIP3P21580 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
TNFAIP3P21580 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.13■■□□□ 1.29
TNFAIP3P21580 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
TNFAIP3P21580 AC068587.7-201ENST00000641602 218 ntBASIC23.13■■□□□ 1.29
TNFAIP3P21580 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms