Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQA1P01909 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HLA-DQA1P01909 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQA1P01909 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQA1P01909 GOLGA2P6-201ENST00000340929 2049 ntBASIC16.28■□□□□ 0.2
HLA-DQA1P01909 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HLA-DQA1P01909 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQA1P01909 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC16.28■□□□□ 0.2
HLA-DQA1P01909 AL353803.4-201ENST00000565882 1934 ntBASIC16.28■□□□□ 0.2
HLA-DQA1P01909 ABHD17AP3-201ENST00000503096 1137 ntBASIC16.28■□□□□ 0.2
HLA-DQA1P01909 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQA1P01909 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQA1P01909 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-DQA1P01909 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQA1P01909 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQA1P01909 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQA1P01909 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQA1P01909 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQA1P01909 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-DQA1P01909 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQA1P01909 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.27■□□□□ 0.2
HLA-DQA1P01909 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-DQA1P01909 AL157400.5-201ENST00000507624 621 ntBASIC16.27■□□□□ 0.2
HLA-DQA1P01909 Z98882.1-201ENST00000622160 2253 ntBASIC16.27■□□□□ 0.2
HLA-DQA1P01909 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQA1P01909 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DQA1P01909 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DQA1P01909 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.27■□□□□ 0.19
HLA-DQA1P01909 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DQA1P01909 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQA1P01909 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HLA-DQA1P01909 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC16.26■□□□□ 0.19
HLA-DQA1P01909 REST-210ENST00000638187 1334 ntTSL 5 BASIC16.26■□□□□ 0.19
HLA-DQA1P01909 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQA1P01909 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQA1P01909 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQA1P01909 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
HLA-DQA1P01909 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
HLA-DQA1P01909 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DQA1P01909 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DQA1P01909 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HLA-DQA1P01909 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC16.26■□□□□ 0.19
HLA-DQA1P01909 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQA1P01909 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HLA-DQA1P01909 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HLA-DQA1P01909 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HLA-DQA1P01909 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQA1P01909 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQA1P01909 LINC01006-201ENST00000333319 2292 ntBASIC16.26■□□□□ 0.19
HLA-DQA1P01909 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
HLA-DQA1P01909 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQA1P01909 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HLA-DQA1P01909 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DQA1P01909 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQA1P01909 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQA1P01909 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQA1P01909 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.25■□□□□ 0.19
HLA-DQA1P01909 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQA1P01909 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
HLA-DQA1P01909 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
HLA-DQA1P01909 AL391422.3-201ENST00000603791 2761 ntBASIC16.25■□□□□ 0.19
HLA-DQA1P01909 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQA1P01909 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQA1P01909 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
HLA-DQA1P01909 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQA1P01909 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC16.25■□□□□ 0.19
HLA-DQA1P01909 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQA1P01909 FEM1AP4-201ENST00000443167 1987 ntBASIC16.25■□□□□ 0.19
HLA-DQA1P01909 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQA1P01909 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQA1P01909 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC16.25■□□□□ 0.19
HLA-DQA1P01909 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQA1P01909 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQA1P01909 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQA1P01909 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQA1P01909 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQA1P01909 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQA1P01909 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQA1P01909 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC16.24■□□□□ 0.19
HLA-DQA1P01909 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQA1P01909 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQA1P01909 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQA1P01909 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
HLA-DQA1P01909 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQA1P01909 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQA1P01909 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQA1P01909 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQA1P01909 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQA1P01909 HES4-202ENST00000428771 1040 ntTSL 2 BASIC16.24■□□□□ 0.19
HLA-DQA1P01909 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQA1P01909 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
HLA-DQA1P01909 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.24■□□□□ 0.19
HLA-DQA1P01909 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
HLA-DQA1P01909 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
HLA-DQA1P01909 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQA1P01909 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQA1P01909 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQA1P01909 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQA1P01909 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
HLA-DQA1P01909 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms