Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC22.09■■□□□ 1.13
PDGFBP01127 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC22.09■■□□□ 1.13
PDGFBP01127 AC093787.1-201ENST00000450396 207 ntBASIC22.09■■□□□ 1.13
PDGFBP01127 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC22.09■■□□□ 1.13
PDGFBP01127 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC22.09■■□□□ 1.13
PDGFBP01127 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC22.09■■□□□ 1.13
PDGFBP01127 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PDGFBP01127 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
PDGFBP01127 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
PDGFBP01127 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
PDGFBP01127 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PDGFBP01127 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
PDGFBP01127 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PDGFBP01127 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.08■■□□□ 1.13
PDGFBP01127 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.08■■□□□ 1.13
PDGFBP01127 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PDGFBP01127 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
PDGFBP01127 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PDGFBP01127 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PDGFBP01127 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PDGFBP01127 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PDGFBP01127 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
PDGFBP01127 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC22.08■■□□□ 1.13
PDGFBP01127 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PDGFBP01127 UNC93B4-201ENST00000505679 747 ntBASIC22.08■■□□□ 1.13
PDGFBP01127 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PDGFBP01127 AC009237.3-201ENST00000393279 1427 ntBASIC22.07■■□□□ 1.12
PDGFBP01127 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.07■■□□□ 1.12
PDGFBP01127 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.07■■□□□ 1.12
PDGFBP01127 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
PDGFBP01127 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC22.07■■□□□ 1.12
PDGFBP01127 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PDGFBP01127 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.07■■□□□ 1.12
PDGFBP01127 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PDGFBP01127 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
PDGFBP01127 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.07■■□□□ 1.12
PDGFBP01127 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.06■■□□□ 1.12
PDGFBP01127 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC22.06■■□□□ 1.12
PDGFBP01127 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC22.06■■□□□ 1.12
PDGFBP01127 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC22.06■■□□□ 1.12
PDGFBP01127 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC22.06■■□□□ 1.12
PDGFBP01127 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
PDGFBP01127 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC22.06■■□□□ 1.12
PDGFBP01127 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PDGFBP01127 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PDGFBP01127 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
PDGFBP01127 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.05■■□□□ 1.12
PDGFBP01127 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
PDGFBP01127 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.05■■□□□ 1.12
PDGFBP01127 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PDGFBP01127 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
PDGFBP01127 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PDGFBP01127 MIR1224-201ENST00000408193 85 ntBASIC22.05■■□□□ 1.12
PDGFBP01127 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC22.05■■□□□ 1.12
PDGFBP01127 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PDGFBP01127 MMAB-206ENST00000540016 945 ntTSL 3 BASIC22.05■■□□□ 1.12
PDGFBP01127 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC22.05■■□□□ 1.12
PDGFBP01127 MMD2-204ENST00000612910 778 ntTSL 5 BASIC22.05■■□□□ 1.12
PDGFBP01127 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PDGFBP01127 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PDGFBP01127 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PDGFBP01127 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PDGFBP01127 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC22.04■■□□□ 1.12
PDGFBP01127 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC22.04■■□□□ 1.12
PDGFBP01127 AC016405.3-201ENST00000607710 860 ntBASIC22.04■■□□□ 1.12
PDGFBP01127 AC013268.1-206ENST00000638368 961 ntBASIC22.04■■□□□ 1.12
PDGFBP01127 AC112229.1-201ENST00000639295 961 ntBASIC22.04■■□□□ 1.12
PDGFBP01127 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.04■■□□□ 1.12
PDGFBP01127 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
PDGFBP01127 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
PDGFBP01127 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDGFBP01127 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
PDGFBP01127 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PDGFBP01127 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC22.03■■□□□ 1.12
PDGFBP01127 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PDGFBP01127 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC22.03■■□□□ 1.12
PDGFBP01127 GAS7-202ENST00000396115 929 ntTSL 5 BASIC22.03■■□□□ 1.12
PDGFBP01127 BX276092.2-201ENST00000417668 665 ntBASIC22.03■■□□□ 1.12
PDGFBP01127 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC22.03■■□□□ 1.12
PDGFBP01127 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
PDGFBP01127 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC22.03■■□□□ 1.12
PDGFBP01127 USP36-216ENST00000589424 970 ntTSL 5 BASIC22.03■■□□□ 1.12
PDGFBP01127 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.03■■□□□ 1.12
PDGFBP01127 MYC-209ENST00000641252 345 ntBASIC22.03■■□□□ 1.12
PDGFBP01127 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PDGFBP01127 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
PDGFBP01127 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.03■■□□□ 1.12
PDGFBP01127 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PDGFBP01127 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
PDGFBP01127 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PDGFBP01127 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PDGFBP01127 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
PDGFBP01127 PEX7-202ENST00000367756 680 ntTSL 3 BASIC22.02■■□□□ 1.12
PDGFBP01127 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC22.02■■□□□ 1.12
PDGFBP01127 ECEL1P3-201ENST00000427961 737 ntBASIC22.02■■□□□ 1.12
PDGFBP01127 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC22.02■■□□□ 1.12
PDGFBP01127 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC22.02■■□□□ 1.12
PDGFBP01127 AC010141.2-201ENST00000452426 721 ntBASIC22.02■■□□□ 1.12
PDGFBP01127 TERF1P5-201ENST00000477545 1207 ntBASIC22.02■■□□□ 1.12
PDGFBP01127 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms