Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC27.56■■■□□ 2
CACNA1FO60840 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC27.56■■■□□ 2
CACNA1FO60840 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CACNA1FO60840 NME4-202ENST00000382940 766 ntTSL 3 BASIC27.56■■■□□ 2
CACNA1FO60840 KRT18P5-201ENST00000436075 1291 ntBASIC27.56■■■□□ 2
CACNA1FO60840 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC27.56■■■□□ 2
CACNA1FO60840 NME4-211ENST00000620944 1193 ntTSL 2 BASIC27.56■■■□□ 2
CACNA1FO60840 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC27.56■■■□□ 2
CACNA1FO60840 AC012676.1-201ENST00000574705 1949 ntBASIC27.56■■■□□ 2
CACNA1FO60840 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC27.56■■■□□ 2
CACNA1FO60840 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC27.56■■■□□ 2
CACNA1FO60840 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC27.56■■■□□ 2
CACNA1FO60840 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CACNA1FO60840 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC27.55■■■□□ 2
CACNA1FO60840 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CACNA1FO60840 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC27.55■■■□□ 2
CACNA1FO60840 CPT2-209ENST00000636935 803 ntTSL 5 BASIC27.55■■■□□ 2
CACNA1FO60840 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC27.55■■■□□ 2
CACNA1FO60840 AP006587.3-201ENST00000525742 1516 ntBASIC27.54■■■□□ 2
CACNA1FO60840 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC27.54■■■□□ 2
CACNA1FO60840 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC27.54■■■□□ 2
CACNA1FO60840 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC27.54■■■□□ 2
CACNA1FO60840 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC27.53■■■□□ 2
CACNA1FO60840 MIR5787-201ENST00000611784 55 ntBASIC27.53■■■□□ 2
CACNA1FO60840 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC27.53■■■□□ 2
CACNA1FO60840 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CACNA1FO60840 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC27.53■■■□□ 2
CACNA1FO60840 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CACNA1FO60840 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC27.53■■■□□ 2
CACNA1FO60840 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC27.53■■■□□ 2
CACNA1FO60840 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC27.53■■■□□ 2
CACNA1FO60840 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC27.53■■■□□ 2
CACNA1FO60840 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC27.53■■■□□ 2
CACNA1FO60840 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC27.53■■■□□ 2
CACNA1FO60840 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC27.53■■■□□ 2
CACNA1FO60840 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CACNA1FO60840 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CACNA1FO60840 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC27.52■■■□□ 2
CACNA1FO60840 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC27.52■■■□□ 2
CACNA1FO60840 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC27.52■■■□□ 2
CACNA1FO60840 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CACNA1FO60840 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC27.52■■■□□ 2
CACNA1FO60840 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC27.52■■■□□ 2
CACNA1FO60840 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CACNA1FO60840 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC27.52■■■□□ 2
CACNA1FO60840 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CACNA1FO60840 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC27.51■■■□□ 2
CACNA1FO60840 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC27.51■■■□□ 2
CACNA1FO60840 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CACNA1FO60840 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■□□□ 1.99
CACNA1FO60840 ASL-203ENST00000380839 1765 ntTSL 5 BASIC27.51■■□□□ 1.99
CACNA1FO60840 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
CACNA1FO60840 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC27.51■■□□□ 1.99
CACNA1FO60840 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
CACNA1FO60840 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC27.5■■□□□ 1.99
CACNA1FO60840 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC27.5■■□□□ 1.99
CACNA1FO60840 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CACNA1FO60840 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC27.5■■□□□ 1.99
CACNA1FO60840 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CACNA1FO60840 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CACNA1FO60840 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC27.49■■□□□ 1.99
CACNA1FO60840 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC27.49■■□□□ 1.99
CACNA1FO60840 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CACNA1FO60840 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC27.49■■□□□ 1.99
CACNA1FO60840 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC27.49■■□□□ 1.99
CACNA1FO60840 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CACNA1FO60840 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC27.49■■□□□ 1.99
CACNA1FO60840 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC27.49■■□□□ 1.99
CACNA1FO60840 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC27.49■■□□□ 1.99
CACNA1FO60840 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC27.49■■□□□ 1.99
CACNA1FO60840 AC080038.3-201ENST00000623346 1952 ntBASIC27.49■■□□□ 1.99
CACNA1FO60840 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
CACNA1FO60840 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC27.48■■□□□ 1.99
CACNA1FO60840 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
CACNA1FO60840 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CACNA1FO60840 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CACNA1FO60840 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC27.48■■□□□ 1.99
CACNA1FO60840 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CACNA1FO60840 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
CACNA1FO60840 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
CACNA1FO60840 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC27.48■■□□□ 1.99
CACNA1FO60840 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
CACNA1FO60840 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CACNA1FO60840 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC27.48■■□□□ 1.99
CACNA1FO60840 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
CACNA1FO60840 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC27.48■■□□□ 1.99
CACNA1FO60840 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CACNA1FO60840 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CACNA1FO60840 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
CACNA1FO60840 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
CACNA1FO60840 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
CACNA1FO60840 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CACNA1FO60840 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
CACNA1FO60840 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CACNA1FO60840 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CACNA1FO60840 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CACNA1FO60840 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
CACNA1FO60840 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC27.47■■□□□ 1.99
CACNA1FO60840 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC27.47■■□□□ 1.99
CACNA1FO60840 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC27.46■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms