Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV5-5A0A0J9YX44 AC092028.1-203ENST00000608262 953 ntBASIC18.84■□□□□ 0.61
TRBV5-5A0A0J9YX44 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV5-5A0A0J9YX44 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV5-5A0A0J9YX44 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV5-5A0A0J9YX44 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.84■□□□□ 0.61
TRBV5-5A0A0J9YX44 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV5-5A0A0J9YX44 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV5-5A0A0J9YX44 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV5-5A0A0J9YX44 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV5-5A0A0J9YX44 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TRBV5-5A0A0J9YX44 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.83■□□□□ 0.61
TRBV5-5A0A0J9YX44 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRBV5-5A0A0J9YX44 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
TRBV5-5A0A0J9YX44 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.83■□□□□ 0.6
TRBV5-5A0A0J9YX44 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.83■□□□□ 0.6
TRBV5-5A0A0J9YX44 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
TRBV5-5A0A0J9YX44 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV5-5A0A0J9YX44 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.83■□□□□ 0.6
TRBV5-5A0A0J9YX44 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV5-5A0A0J9YX44 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.83■□□□□ 0.6
TRBV5-5A0A0J9YX44 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.83■□□□□ 0.6
TRBV5-5A0A0J9YX44 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV5-5A0A0J9YX44 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV5-5A0A0J9YX44 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TRBV5-5A0A0J9YX44 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
TRBV5-5A0A0J9YX44 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TRBV5-5A0A0J9YX44 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV5-5A0A0J9YX44 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
TRBV5-5A0A0J9YX44 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV5-5A0A0J9YX44 SLC25A24-204ENST00000569674 2357 ntBASIC18.82■□□□□ 0.6
TRBV5-5A0A0J9YX44 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV5-5A0A0J9YX44 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV5-5A0A0J9YX44 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV5-5A0A0J9YX44 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV5-5A0A0J9YX44 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV5-5A0A0J9YX44 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.81■□□□□ 0.6
TRBV5-5A0A0J9YX44 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.81■□□□□ 0.6
TRBV5-5A0A0J9YX44 AL031602.1-201ENST00000633169 911 ntBASIC18.81■□□□□ 0.6
TRBV5-5A0A0J9YX44 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TRBV5-5A0A0J9YX44 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV5-5A0A0J9YX44 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.81■□□□□ 0.6
TRBV5-5A0A0J9YX44 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
TRBV5-5A0A0J9YX44 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV5-5A0A0J9YX44 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV5-5A0A0J9YX44 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TRBV5-5A0A0J9YX44 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TRBV5-5A0A0J9YX44 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV5-5A0A0J9YX44 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.8■□□□□ 0.6
TRBV5-5A0A0J9YX44 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRBV5-5A0A0J9YX44 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TRBV5-5A0A0J9YX44 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV5-5A0A0J9YX44 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
TRBV5-5A0A0J9YX44 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV5-5A0A0J9YX44 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV5-5A0A0J9YX44 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV5-5A0A0J9YX44 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TRBV5-5A0A0J9YX44 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.8■□□□□ 0.6
TRBV5-5A0A0J9YX44 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.8■□□□□ 0.6
TRBV5-5A0A0J9YX44 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.8■□□□□ 0.6
TRBV5-5A0A0J9YX44 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV5-5A0A0J9YX44 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV5-5A0A0J9YX44 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRBV5-5A0A0J9YX44 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV5-5A0A0J9YX44 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV5-5A0A0J9YX44 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV5-5A0A0J9YX44 AF106564.1-201ENST00000607058 2553 ntBASIC18.8■□□□□ 0.6
TRBV5-5A0A0J9YX44 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV5-5A0A0J9YX44 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TRBV5-5A0A0J9YX44 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV5-5A0A0J9YX44 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-5A0A0J9YX44 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-5A0A0J9YX44 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-5A0A0J9YX44 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.79■□□□□ 0.6
TRBV5-5A0A0J9YX44 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-5A0A0J9YX44 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-5A0A0J9YX44 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.79■□□□□ 0.6
TRBV5-5A0A0J9YX44 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-5A0A0J9YX44 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-5A0A0J9YX44 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TRBV5-5A0A0J9YX44 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-5A0A0J9YX44 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TRBV5-5A0A0J9YX44 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.79■□□□□ 0.6
TRBV5-5A0A0J9YX44 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TRBV5-5A0A0J9YX44 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-5A0A0J9YX44 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-5A0A0J9YX44 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-5A0A0J9YX44 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-5A0A0J9YX44 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-5A0A0J9YX44 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-5A0A0J9YX44 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-5A0A0J9YX44 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV5-5A0A0J9YX44 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV5-5A0A0J9YX44 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.78■□□□□ 0.6
TRBV5-5A0A0J9YX44 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV5-5A0A0J9YX44 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV5-5A0A0J9YX44 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TRBV5-5A0A0J9YX44 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV5-5A0A0J9YX44 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TRBV5-5A0A0J9YX44 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms