Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAV25A0A0B4J276 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.28■□□□□ 0.2
TRAV25A0A0B4J276 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAV25A0A0B4J276 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV25A0A0B4J276 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TRAV25A0A0B4J276 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV25A0A0B4J276 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TRAV25A0A0B4J276 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV25A0A0B4J276 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV25A0A0B4J276 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV25A0A0B4J276 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TRAV25A0A0B4J276 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.28■□□□□ 0.2
TRAV25A0A0B4J276 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
TRAV25A0A0B4J276 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV25A0A0B4J276 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV25A0A0B4J276 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV25A0A0B4J276 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAV25A0A0B4J276 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
TRAV25A0A0B4J276 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV25A0A0B4J276 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV25A0A0B4J276 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV25A0A0B4J276 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV25A0A0B4J276 JTB-203ENST00000368589 1216 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAV25A0A0B4J276 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV25A0A0B4J276 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV25A0A0B4J276 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV25A0A0B4J276 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC16.27■□□□□ 0.2
TRAV25A0A0B4J276 AC123595.1-201ENST00000440769 1046 ntBASIC16.27■□□□□ 0.2
TRAV25A0A0B4J276 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV25A0A0B4J276 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.27■□□□□ 0.2
TRAV25A0A0B4J276 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC16.27■□□□□ 0.2
TRAV25A0A0B4J276 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV25A0A0B4J276 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.27■□□□□ 0.19
TRAV25A0A0B4J276 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV25A0A0B4J276 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC16.27■□□□□ 0.19
TRAV25A0A0B4J276 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV25A0A0B4J276 CASK-201ENST00000378154 2494 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV25A0A0B4J276 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV25A0A0B4J276 BX005040.4-201ENST00000637145 1518 ntBASIC16.26■□□□□ 0.19
TRAV25A0A0B4J276 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV25A0A0B4J276 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV25A0A0B4J276 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TRAV25A0A0B4J276 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.26■□□□□ 0.19
TRAV25A0A0B4J276 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAV25A0A0B4J276 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAV25A0A0B4J276 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAV25A0A0B4J276 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV25A0A0B4J276 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC16.26■□□□□ 0.19
TRAV25A0A0B4J276 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV25A0A0B4J276 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV25A0A0B4J276 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV25A0A0B4J276 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV25A0A0B4J276 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV25A0A0B4J276 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV25A0A0B4J276 AC137767.1-201ENST00000602918 1920 ntBASIC16.25■□□□□ 0.19
TRAV25A0A0B4J276 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TRAV25A0A0B4J276 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC16.25■□□□□ 0.19
TRAV25A0A0B4J276 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV25A0A0B4J276 COMT-203ENST00000403184 2217 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV25A0A0B4J276 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV25A0A0B4J276 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV25A0A0B4J276 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV25A0A0B4J276 YBX1P1-201ENST00000445822 960 ntBASIC16.25■□□□□ 0.19
TRAV25A0A0B4J276 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV25A0A0B4J276 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV25A0A0B4J276 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC16.25■□□□□ 0.19
TRAV25A0A0B4J276 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC16.25■□□□□ 0.19
TRAV25A0A0B4J276 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV25A0A0B4J276 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV25A0A0B4J276 AC009237.3-201ENST00000393279 1427 ntBASIC16.25■□□□□ 0.19
TRAV25A0A0B4J276 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV25A0A0B4J276 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TRAV25A0A0B4J276 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRAV25A0A0B4J276 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV25A0A0B4J276 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC16.24■□□□□ 0.19
TRAV25A0A0B4J276 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV25A0A0B4J276 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV25A0A0B4J276 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
TRAV25A0A0B4J276 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
TRAV25A0A0B4J276 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TRAV25A0A0B4J276 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.24■□□□□ 0.19
TRAV25A0A0B4J276 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV25A0A0B4J276 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TRAV25A0A0B4J276 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC16.24■□□□□ 0.19
TRAV25A0A0B4J276 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC16.24■□□□□ 0.19
TRAV25A0A0B4J276 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV25A0A0B4J276 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV25A0A0B4J276 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV25A0A0B4J276 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV25A0A0B4J276 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV25A0A0B4J276 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV25A0A0B4J276 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV25A0A0B4J276 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV25A0A0B4J276 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV25A0A0B4J276 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV25A0A0B4J276 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV25A0A0B4J276 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV25A0A0B4J276 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV25A0A0B4J276 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV25A0A0B4J276 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms