Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC12.95□□□□□ -0.34
SLC1A1P43005 AC018868.2-201ENST00000559655 1259 ntBASIC12.95□□□□□ -0.34
SLC1A1P43005 AC027139.1-201ENST00000565286 951 ntBASIC12.95□□□□□ -0.34
SLC1A1P43005 KRT16P4-202ENST00000580052 362 ntTSL 3 BASIC12.95□□□□□ -0.34
SLC1A1P43005 MIR4750-201ENST00000584564 56 ntBASIC12.95□□□□□ -0.34
SLC1A1P43005 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC12.95□□□□□ -0.34
SLC1A1P43005 AL033381.2-201ENST00000603854 732 ntBASIC12.95□□□□□ -0.34
SLC1A1P43005 AL589743.3-201ENST00000604121 517 ntBASIC12.95□□□□□ -0.34
SLC1A1P43005 AC008897.3-201ENST00000607296 483 ntBASIC12.95□□□□□ -0.34
SLC1A1P43005 AL109618.3-201ENST00000622748 430 ntBASIC12.95□□□□□ -0.34
SLC1A1P43005 LINC00963-216ENST00000623185 786 ntTSL 5 BASIC12.95□□□□□ -0.34
SLC1A1P43005 AC127024.7-201ENST00000625101 200 ntBASIC12.95□□□□□ -0.34
SLC1A1P43005 FAM92B-203ENST00000629253 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SLC1A1P43005 SLC17A2-201ENST00000265425 1493 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SLC1A1P43005 NARF-201ENST00000309794 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SLC1A1P43005 PLAT-204ENST00000429710 1655 ntTSL 2 BASIC12.95□□□□□ -0.34
SLC1A1P43005 SLA2-201ENST00000262866 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SLC1A1P43005 PKP2-202ENST00000340811 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SLC1A1P43005 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SLC1A1P43005 SLC44A3-204ENST00000467909 2061 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SLC1A1P43005 ZNF488-202ENST00000591025 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SLC1A1P43005 CDC25B-201ENST00000245960 3597 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
SLC1A1P43005 AC078850.1-201ENST00000514265 1623 ntTSL 2 BASIC12.95□□□□□ -0.34
SLC1A1P43005 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC12.95□□□□□ -0.34
SLC1A1P43005 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC12.95□□□□□ -0.34
SLC1A1P43005 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SLC1A1P43005 LINC02210-CRHR1-202ENST00000634540 2695 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SLC1A1P43005 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SLC1A1P43005 GPD1-201ENST00000301149 3082 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SLC1A1P43005 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SLC1A1P43005 RFC3-201ENST00000380071 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SLC1A1P43005 AKR1B10-201ENST00000359579 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SLC1A1P43005 ZNF101-203ENST00000415784 1552 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SLC1A1P43005 FAM27E3-201ENST00000418795 1593 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SLC1A1P43005 SNRK-202ENST00000429705 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SLC1A1P43005 ARSF-201ENST00000359361 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SLC1A1P43005 STYX-201ENST00000354586 4857 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SLC1A1P43005 AC020915.2-201ENST00000591325 4227 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SLC1A1P43005 GTF2I-218ENST00000620879 4352 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SLC1A1P43005 ENO3-201ENST00000323997 1521 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SLC1A1P43005 WDR92-203ENST00000409164 1517 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SLC1A1P43005 EBNA1BP2-202ENST00000431635 1503 ntTSL 2 BASIC12.94□□□□□ -0.34
SLC1A1P43005 IMPDH1P5-201ENST00000439688 1540 ntBASIC12.94□□□□□ -0.34
SLC1A1P43005 IMPDH1P10-201ENST00000440965 1542 ntBASIC12.94□□□□□ -0.34
SLC1A1P43005 AP1G1-218ENST00000569748 4554 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
SLC1A1P43005 PRAMEF20-202ENST00000602960 1502 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SLC1A1P43005 TUBE1-202ENST00000368662 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SLC1A1P43005 METTL13-201ENST00000361735 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SLC1A1P43005 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SLC1A1P43005 DSCR3-201ENST00000309117 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SLC1A1P43005 C2orf15-201ENST00000302513 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SLC1A1P43005 ASAH1-202ENST00000314146 1690 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SLC1A1P43005 ZNF423-207ENST00000567169 4017 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SLC1A1P43005 OBP2A-203ENST00000371776 689 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SLC1A1P43005 APTX-203ENST00000379813 1121 ntTSL 5 BASIC12.94□□□□□ -0.34
SLC1A1P43005 MEOX1-203ENST00000393661 1206 ntTSL 3 BASIC12.94□□□□□ -0.34
SLC1A1P43005 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC12.94□□□□□ -0.34
SLC1A1P43005 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
SLC1A1P43005 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SLC1A1P43005 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC12.94□□□□□ -0.34
SLC1A1P43005 AL137244.1-201ENST00000422931 865 ntBASIC12.94□□□□□ -0.34
SLC1A1P43005 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC12.94□□□□□ -0.34
SLC1A1P43005 AL590068.2-201ENST00000426067 378 ntTSL 3 BASIC12.94□□□□□ -0.34
SLC1A1P43005 AC069421.1-201ENST00000447462 323 ntBASIC12.94□□□□□ -0.34
SLC1A1P43005 AC005996.2-201ENST00000465549 564 ntTSL 4 BASIC12.94□□□□□ -0.34
SLC1A1P43005 RN7SL16P-201ENST00000476316 269 ntBASIC12.94□□□□□ -0.34
SLC1A1P43005 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC12.94□□□□□ -0.34
SLC1A1P43005 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC12.94□□□□□ -0.34
SLC1A1P43005 IGHV3-6-201ENST00000518407 347 ntBASIC12.94□□□□□ -0.34
SLC1A1P43005 AL353708.1-201ENST00000567904 1257 ntBASIC12.94□□□□□ -0.34
SLC1A1P43005 AL138828.1-208ENST00000585946 824 ntTSL 5 BASIC12.94□□□□□ -0.34
SLC1A1P43005 AC090950.1-202ENST00000605733 644 ntBASIC12.94□□□□□ -0.34
SLC1A1P43005 AC084018.1-201ENST00000609067 572 ntTSL 4 BASIC12.94□□□□□ -0.34
SLC1A1P43005 AC016292.2-201ENST00000618967 210 ntBASIC12.94□□□□□ -0.34
SLC1A1P43005 LINC00969-263ENST00000626007 839 ntTSL 5 BASIC12.94□□□□□ -0.34
SLC1A1P43005 AC244226.1-201ENST00000631943 402 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
SLC1A1P43005 ATP2C1-221ENST00000513801 3439 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SLC1A1P43005 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC12.94□□□□□ -0.34
SLC1A1P43005 AL445647.1-201ENST00000606221 3599 ntBASIC12.94□□□□□ -0.34
SLC1A1P43005 SLC18A1-201ENST00000265808 2770 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SLC1A1P43005 DDX4-201ENST00000353507 2778 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SLC1A1P43005 AC100774.1-201ENST00000565581 1603 ntBASIC12.94□□□□□ -0.34
SLC1A1P43005 TMEM199-201ENST00000292114 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SLC1A1P43005 C1QTNF3-201ENST00000231338 1959 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SLC1A1P43005 ARHGAP12-203ENST00000375245 4958 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SLC1A1P43005 PRRG4-201ENST00000257836 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SLC1A1P43005 NEK6-205ENST00000394199 2535 ntTSL 2 BASIC12.94□□□□□ -0.34
SLC1A1P43005 SFPQP1-201ENST00000446621 1786 ntBASIC12.94□□□□□ -0.34
SLC1A1P43005 SPOCK3-203ENST00000421836 3061 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
SLC1A1P43005 HDAC8-214ENST00000439122 2338 ntTSL 2 BASIC12.94□□□□□ -0.34
SLC1A1P43005 LILRA1-202ENST00000453777 2313 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SLC1A1P43005 ITPRIP-203ENST00000358187 3981 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SLC1A1P43005 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SLC1A1P43005 GABBR1-203ENST00000377012 4104 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SLC1A1P43005 ASPH-208ENST00000517856 6337 ntTSL 2 BASIC12.94□□□□□ -0.34
SLC1A1P43005 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC12.93□□□□□ -0.34
SLC1A1P43005 STXBP1-218ENST00000637173 4193 ntTSL 5 BASIC12.93□□□□□ -0.34
SLC1A1P43005 CEP89-207ENST00000591863 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SLC1A1P43005 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC12.93□□□□□ -0.34
SLC1A1P43005 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms