RNA–Protein interactions for RNA: ENST00000340811.8

PKP2-202, Transcript of plakophilin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-202ENST00000340811 NISCHQ9Y2I1 1504 aa24.16■■□□□ 1.46
PKP2-202ENST00000340811 DCAF8L2P0C7V8 631 aa22.78■■□□□ 1.24
PKP2-202ENST00000340811 SHROOM4Q9ULL8 1493 aa21.98■■□□□ 1.11
PKP2-202ENST00000340811 SUPT5HO00267 1087 aaKnown RBP21.7■■□□□ 1.06
PKP2-202ENST00000340811 EHMT2Q96KQ7 1210 aa20.65■□□□□ 0.9
PKP2-202ENST00000340811 ABCC9O60706 1549 aa20.5■□□□□ 0.87
PKP2-202ENST00000340811 FAM9AQ8IZU1 332 aaPredicted RBP20.33■□□□□ 0.85
PKP2-202ENST00000340811 ZCCHC6Q5VYS8 1495 aaKnown RBP20.13■□□□□ 0.81
PKP2-202ENST00000340811 PABPN1Q86U42 306 aaKnown RBP eCLIP20.06■□□□□ 0.8
PKP2-202ENST00000340811 CCDC180Q9P1Z9 1646 aa20.03■□□□□ 0.8
PKP2-202ENST00000340811 TRIM41Q8WV44 630 aa19.99■□□□□ 0.79
PKP2-202ENST00000340811 CHIC1Q5VXU3 224 aa19.96■□□□□ 0.79
PKP2-202ENST00000340811 LOC105371045A0A1W2PR82 267 aa19.83■□□□□ 0.76
PKP2-202ENST00000340811 TTBK1Q5TCY1 1321 aaPredicted RBP19.79■□□□□ 0.76
PKP2-202ENST00000340811 SCRIBQ14160 1630 aa19.76■□□□□ 0.75
PKP2-202ENST00000340811 PCGF6Q9BYE7 350 aa19.75■□□□□ 0.75
PKP2-202ENST00000340811 RANGAP1P46060 587 aaPredicted RBP19.72■□□□□ 0.75
PKP2-202ENST00000340811 PPARGC1BQ86YN6 1023 aaKnown RBP19.59■□□□□ 0.73
PKP2-202ENST00000340811 APLP2Q06481 763 aa19.53■□□□□ 0.72
PKP2-202ENST00000340811 UBTFP17480 764 aaKnown RBP19.46■□□□□ 0.71
PKP2-202ENST00000340811 ATP1B4Q9UN42 357 aaPredicted RBP19.29■□□□□ 0.68
PKP2-202ENST00000340811 RSF1Q96T23 1441 aaPredicted RBP19.24■□□□□ 0.67
PKP2-202ENST00000340811 DCAF1Q9Y4B6 1507 aa19.21■□□□□ 0.67
PKP2-202ENST00000340811 CECR2Q9BXF3 1484 aa19.2■□□□□ 0.66
PKP2-202ENST00000340811 RB1CC1Q8TDY2 1594 aa19.16■□□□□ 0.66
PKP2-202ENST00000340811 NACADO15069 1562 aa19.16■□□□□ 0.66
PKP2-202ENST00000340811 MYO15BQ96JP2 1530 aa19.08■□□□□ 0.65
PKP2-202ENST00000340811 TRIM26Q12899 539 aaPredicted RBP18.98■□□□□ 0.63
PKP2-202ENST00000340811 CCER1Q8TC90 406 aaPredicted RBP18.91■□□□□ 0.62
PKP2-202ENST00000340811 MROH2BQ7Z745 1585 aa18.9■□□□□ 0.62
PKP2-202ENST00000340811 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.83■□□□□ 0.6
PKP2-202ENST00000340811 HNRNPUL2Q1KMD3 747 aaKnown RBP18.83■□□□□ 0.6
PKP2-202ENST00000340811 CSRNP3Q8WYN3 585 aa18.8■□□□□ 0.6
PKP2-202ENST00000340811 HRCP23327 699 aa18.78■□□□□ 0.6
PKP2-202ENST00000340811 ITGAEP38570 1179 aa18.76■□□□□ 0.59
PKP2-202ENST00000340811 BAZ1AQ9NRL2 1556 aaPredicted RBP18.69■□□□□ 0.58
PKP2-202ENST00000340811 WIZO95785 1651 aa18.66■□□□□ 0.58
PKP2-202ENST00000340811 MYT1LQ9UL68 1186 aa18.64■□□□□ 0.57
PKP2-202ENST00000340811 FBLN2P98095 1184 aa18.64■□□□□ 0.57
PKP2-202ENST00000340811 P3H3Q8IVL6 736 aa18.61■□□□□ 0.57
PKP2-202ENST00000340811 BAZ1BQ9UIG0 1483 aaKnown RBP18.59■□□□□ 0.57
PKP2-202ENST00000340811 CCDC88BA6NC98 1476 aa18.54■□□□□ 0.56
PKP2-202ENST00000340811 ZEB1P37275 1124 aaPredicted RBP18.53■□□□□ 0.56
PKP2-202ENST00000340811 ABCC8Q09428 1581 aa18.48■□□□□ 0.55
PKP2-202ENST00000340811 WRNQ14191 1432 aaPredicted RBP eCLIP18.45■□□□□ 0.54
PKP2-202ENST00000340811 ARID3CA6NKF2 412 aa18.44■□□□□ 0.54
PKP2-202ENST00000340811 SOGA1O94964 1423 aa18.43■□□□□ 0.54
PKP2-202ENST00000340811 SMARCA4P51532 1647 aa18.34■□□□□ 0.53
PKP2-202ENST00000340811 FAM50AQ14320 339 aaKnown RBP18.33■□□□□ 0.52
PKP2-202ENST00000340811 ATAD2BQ9ULI0 1458 aa18.3■□□□□ 0.52
PKP2-202ENST00000340811 TOP2AP11388 1531 aaKnown RBP18.28■□□□□ 0.52
PKP2-202ENST00000340811 CEP162Q5TB80 1403 aa18.23■□□□□ 0.51
PKP2-202ENST00000340811 YTHDC1Q96MU7 727 aaKnown RBP18.21■□□□□ 0.51
PKP2-202ENST00000340811 RUSC2Q8N2Y8 1516 aa18.19■□□□□ 0.5
PKP2-202ENST00000340811 CLIP1P30622 1438 aa18.17■□□□□ 0.5
PKP2-202ENST00000340811 SMARCA2P51531 1590 aa18.17■□□□□ 0.5
PKP2-202ENST00000340811 GOLGA3Q08378 1498 aa18.1■□□□□ 0.49
PKP2-202ENST00000340811 TNIKQ9UKE5 1360 aa18.08■□□□□ 0.48
PKP2-202ENST00000340811 NEUROD1Q13562 356 aa18.07■□□□□ 0.48
PKP2-202ENST00000340811 BICRAQ9NZM4 1560 aa18.06■□□□□ 0.48
PKP2-202ENST00000340811 EEA1Q15075 1411 aa18.06■□□□□ 0.48
PKP2-202ENST00000340811 KIF27Q86VH2 1401 aa18.05■□□□□ 0.48
PKP2-202ENST00000340811 DNAJC5BQ9UF47 199 aa18.01■□□□□ 0.47
PKP2-202ENST00000340811 CUX2O14529 1486 aa18.01■□□□□ 0.47
PKP2-202ENST00000340811 CEP164Q9UPV0 1460 aa18■□□□□ 0.47
PKP2-202ENST00000340811 CADPSQ9ULU8 1353 aa17.98■□□□□ 0.47
PKP2-202ENST00000340811 EIF4G1Q04637 1599 aaKnown RBP17.97■□□□□ 0.47
PKP2-202ENST00000340811 TRIM52Q96A61 297 aa17.96■□□□□ 0.47
PKP2-202ENST00000340811 DIEXFQ68CQ4 756 aaKnown RBP17.95■□□□□ 0.46
PKP2-202ENST00000340811 TDRD9Q8NDG6 1382 aaKnown RBP17.95■□□□□ 0.46
PKP2-202ENST00000340811 CHMP7Q8WUX9 453 aaPredicted RBP17.95■□□□□ 0.46
PKP2-202ENST00000340811 POLR3GLQ9BT43 218 aa17.95■□□□□ 0.46
PKP2-202ENST00000340811 CNGB1Q14028 1251 aaPredicted RBP17.94■□□□□ 0.46
PKP2-202ENST00000340811 NPM1P06748 294 aaKnown RBP eCLIP17.93■□□□□ 0.46
PKP2-202ENST00000340811 ZNF777Q9ULD5 760 aaPredicted RBP17.92■□□□□ 0.46
PKP2-202ENST00000340811 CARMIL1Q5VZK9 1371 aa17.9■□□□□ 0.46
PKP2-202ENST00000340811 UNC13AQ9UPW8 1703 aa17.89■□□□□ 0.45
PKP2-202ENST00000340811 RAPGEF2Q9Y4G8 1499 aa17.89■□□□□ 0.45
PKP2-202ENST00000340811 CHIC2Q9UKJ5 165 aa17.88■□□□□ 0.45
PKP2-202ENST00000340811 KANK4Q5T7N3 995 aaPredicted RBP17.87■□□□□ 0.45
PKP2-202ENST00000340811 NCAPD3P42695 1498 aa17.87■□□□□ 0.45
PKP2-202ENST00000340811 CDK11AQ9UQ88 783 aaPredicted RBP17.85■□□□□ 0.45
PKP2-202ENST00000340811 CENPBP07199 599 aaPredicted RBP17.84■□□□□ 0.45
PKP2-202ENST00000340811 ERCC6Q03468 1493 aa17.79■□□□□ 0.44
PKP2-202ENST00000340811 NESP48681 1621 aa17.77■□□□□ 0.43
PKP2-202ENST00000340811 MTUS2Q5JR59 1369 aa17.76■□□□□ 0.43
PKP2-202ENST00000340811 FANCD2Q9BXW9 1451 aa17.76■□□□□ 0.43
PKP2-202ENST00000340811 SYNJ1O43426 1573 aa17.73■□□□□ 0.43
PKP2-202ENST00000340811 ZNF316A6NFI3 1004 aaPredicted RBP17.73■□□□□ 0.43
PKP2-202ENST00000340811 SLC4A1APQ9BWU0 796 aaKnown RBP17.73■□□□□ 0.43
PKP2-202ENST00000340811 ZNF326Q5BKZ1 582 aaKnown RBP17.73■□□□□ 0.43
PKP2-202ENST00000340811 PDS5BQ9NTI5 1447 aa17.72■□□□□ 0.43
PKP2-202ENST00000340811 RAD54L2Q9Y4B4 1467 aa17.71■□□□□ 0.43
PKP2-202ENST00000340811 PELP1Q8IZL8 1130 aaKnown RBP17.7■□□□□ 0.42
PKP2-202ENST00000340811 VPS8Q8N3P4 1428 aa17.7■□□□□ 0.42
PKP2-202ENST00000340811 RRP7BPQ9NSQ0 103 aa17.68■□□□□ 0.42
PKP2-202ENST00000340811 CC2D2AQ9P2K1 1620 aa17.68■□□□□ 0.42
PKP2-202ENST00000340811 HIRIP3Q9BW71 556 aaPredicted RBP17.66■□□□□ 0.42
PKP2-202ENST00000340811 FGD5Q6ZNL6 1462 aa17.65■□□□□ 0.42
PKP2-202ENST00000340811 PLPPR3Q6T4P5 718 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms