Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 MIR100HG-219ENST00000533109 1794 ntTSL 5 BASIC13.17□□□□□ -0.3
LMO3Q8TAP4 ACSM2B-202ENST00000414188 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LMO3Q8TAP4 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LMO3Q8TAP4 CAGE1-201ENST00000296742 2821 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
LMO3Q8TAP4 LINC01304-201ENST00000425949 1475 ntTSL 5 BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 SYNGAP1-207ENST00000628646 4264 ntTSL 5 BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 ENPP4-201ENST00000321037 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 HFE-204ENST00000349999 1704 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 CNGA3-203ENST00000393504 3841 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 ARHGEF4-212ENST00000525839 3828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 ZFR-201ENST00000265069 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 PDIA6-204ENST00000404824 2236 ntTSL 2 BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 CMIP-203ENST00000539778 3937 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 SCNN1B-207ENST00000568085 1825 ntTSL 3 BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 MAGEA9B-203ENST00000595065 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 AL034399.2-201ENST00000430140 2090 ntTSL 2 BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 ERBB2-203ENST00000445658 3238 ntTSL 2 BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 SNX16-203ENST00000396330 3452 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 AC009264.1-205ENST00000439694 2160 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 KRBOX4-203ENST00000377919 993 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 FTH1P18-201ENST00000412071 549 ntBASIC13.16□□□□□ -0.3
LMO3Q8TAP4 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 RN7SL76P-201ENST00000482435 289 ntBASIC13.16□□□□□ -0.3
LMO3Q8TAP4 AC108112.1-201ENST00000505567 659 ntTSL 5 BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 AC011431.1-201ENST00000512971 230 ntBASIC13.16□□□□□ -0.3
LMO3Q8TAP4 HOXC-AS2-201ENST00000513533 504 ntTSL 2 BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 WISP1-204ENST00000517423 716 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 AP002512.2-201ENST00000532561 623 ntBASIC13.16□□□□□ -0.3
LMO3Q8TAP4 KRT128P-201ENST00000550729 663 ntBASIC13.16□□□□□ -0.3
LMO3Q8TAP4 ABCD1P3-201ENST00000562927 605 ntBASIC13.16□□□□□ -0.3
LMO3Q8TAP4 AC009086.1-201ENST00000567219 309 ntBASIC13.16□□□□□ -0.3
LMO3Q8TAP4 TIMM23-201ENST00000580018 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 EMP3-204ENST00000596315 761 ntTSL 2 BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 AC008750.6-201ENST00000598746 322 ntBASIC13.16□□□□□ -0.3
LMO3Q8TAP4 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 AC090093.1-201ENST00000611315 271 ntBASIC13.16□□□□□ -0.3
LMO3Q8TAP4 AL627230.2-201ENST00000613254 655 ntBASIC13.16□□□□□ -0.3
LMO3Q8TAP4 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 EPN3-201ENST00000268933 4071 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 ARHGAP25-203ENST00000409220 2939 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 GDF9-207ENST00000624495 1799 ntTSL 2 BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 ZBTB20-212ENST00000474710 2757 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 FGFR1OP-207ENST00000622353 3451 ntTSL 2 BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 RABEPK-203ENST00000373544 2450 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 AC012184.3-201ENST00000562077 1471 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 LIPG-205ENST00000580036 1453 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LMO3Q8TAP4 SP3P-201ENST00000414049 2065 ntBASIC13.16□□□□□ -0.3
LMO3Q8TAP4 CTBP1-AS2-202ENST00000505364 2423 ntTSL 2 BASIC13.15□□□□□ -0.3
LMO3Q8TAP4 ZNHIT6-201ENST00000370574 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LMO3Q8TAP4 LEMD2-207ENST00000508327 1306 ntTSL 2 BASIC13.15□□□□□ -0.3
LMO3Q8TAP4 ADAM32-203ENST00000437682 2281 ntTSL 2 BASIC13.15□□□□□ -0.3
LMO3Q8TAP4 SV2A-202ENST00000369146 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LMO3Q8TAP4 MSH6-213ENST00000614496 4150 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LMO3Q8TAP4 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LMO3Q8TAP4 DDX4-212ENST00000514278 2451 ntTSL 5 BASIC13.15□□□□□ -0.3
LMO3Q8TAP4 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
LMO3Q8TAP4 ALDOC-202ENST00000395319 1519 ntTSL 5 BASIC13.15□□□□□ -0.3
LMO3Q8TAP4 CEP89-207ENST00000591863 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LMO3Q8TAP4 ARHGAP24-203ENST00000395184 4661 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
LMO3Q8TAP4 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
LMO3Q8TAP4 HDAC8-214ENST00000439122 2338 ntTSL 2 BASIC13.15□□□□□ -0.3
LMO3Q8TAP4 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
LMO3Q8TAP4 FTL-201ENST00000331825 878 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LMO3Q8TAP4 OR52L1-201ENST00000332249 1094 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
LMO3Q8TAP4 MS4A13-202ENST00000378186 928 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LMO3Q8TAP4 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
LMO3Q8TAP4 AL133517.1-201ENST00000413412 748 ntBASIC13.15□□□□□ -0.3
LMO3Q8TAP4 AL359094.2-201ENST00000420941 750 ntTSL 3 BASIC13.15□□□□□ -0.3
LMO3Q8TAP4 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC13.15□□□□□ -0.3
LMO3Q8TAP4 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC13.15□□□□□ -0.3
LMO3Q8TAP4 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC13.15□□□□□ -0.3
LMO3Q8TAP4 HDAC2-AS2-215ENST00000522697 786 ntTSL 3 BASIC13.15□□□□□ -0.3
LMO3Q8TAP4 CETN3-205ENST00000522842 664 ntTSL 2 BASIC13.15□□□□□ -0.3
LMO3Q8TAP4 AC068858.1-201ENST00000525114 1239 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LMO3Q8TAP4 AP002383.2-201ENST00000545768 675 ntBASIC13.15□□□□□ -0.3
LMO3Q8TAP4 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC13.15□□□□□ -0.3
LMO3Q8TAP4 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
LMO3Q8TAP4 LINC00963-217ENST00000624009 663 ntTSL 5 BASIC13.15□□□□□ -0.3
LMO3Q8TAP4 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LMO3Q8TAP4 INAVA-201ENST00000367342 4298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LMO3Q8TAP4 SUGP1-201ENST00000247001 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LMO3Q8TAP4 MAEL-206ENST00000622874 1700 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LMO3Q8TAP4 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LMO3Q8TAP4 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms