RNA–Protein interactions for RNA: ENST00000396330.6

SNX16-203, Transcript of sorting nexin 16, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX16, Length 3,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX16-203ENST00000396330 NISCHQ9Y2I1 1504 aa25.1■■□□□ 1.61
SNX16-203ENST00000396330 SHROOM4Q9ULL8 1493 aa22.05■■□□□ 1.12
SNX16-203ENST00000396330 DCAF8L2P0C7V8 631 aa22■■□□□ 1.11
SNX16-203ENST00000396330 SUPT5HO00267 1087 aaKnown RBP21.64■■□□□ 1.05
SNX16-203ENST00000396330 CCDC180Q9P1Z9 1646 aa21.1■□□□□ 0.97
SNX16-203ENST00000396330 ZCCHC6Q5VYS8 1495 aaKnown RBP21.08■□□□□ 0.97
SNX16-203ENST00000396330 CHIC1Q5VXU3 224 aa20.52■□□□□ 0.88
SNX16-203ENST00000396330 ABCC9O60706 1549 aa20.47■□□□□ 0.87
SNX16-203ENST00000396330 DCAF1Q9Y4B6 1507 aa20.27■□□□□ 0.84
SNX16-203ENST00000396330 SCRIBQ14160 1630 aa20.27■□□□□ 0.83
SNX16-203ENST00000396330 EHMT2Q96KQ7 1210 aa20.22■□□□□ 0.83
SNX16-203ENST00000396330 LOC105371045A0A1W2PR82 267 aa20.17■□□□□ 0.82
SNX16-203ENST00000396330 MYO15BQ96JP2 1530 aa20.16■□□□□ 0.82
SNX16-203ENST00000396330 FAM9AQ8IZU1 332 aaPredicted RBP20.13■□□□□ 0.81
SNX16-203ENST00000396330 PCGF6Q9BYE7 350 aa20.05■□□□□ 0.8
SNX16-203ENST00000396330 TRIM41Q8WV44 630 aa20.01■□□□□ 0.79
SNX16-203ENST00000396330 RSF1Q96T23 1441 aaPredicted RBP19.91■□□□□ 0.78
SNX16-203ENST00000396330 CECR2Q9BXF3 1484 aa19.78■□□□□ 0.76
SNX16-203ENST00000396330 PABPN1Q86U42 306 aaKnown RBP eCLIP19.78■□□□□ 0.76
SNX16-203ENST00000396330 NACADO15069 1562 aa19.77■□□□□ 0.76
SNX16-203ENST00000396330 RB1CC1Q8TDY2 1594 aa19.64■□□□□ 0.73
SNX16-203ENST00000396330 MROH2BQ7Z745 1585 aa19.6■□□□□ 0.73
SNX16-203ENST00000396330 HRCP23327 699 aa19.58■□□□□ 0.73
SNX16-203ENST00000396330 PPARGC1BQ86YN6 1023 aaKnown RBP19.56■□□□□ 0.72
SNX16-203ENST00000396330 TTBK1Q5TCY1 1321 aaPredicted RBP19.46■□□□□ 0.71
SNX16-203ENST00000396330 WIZO95785 1651 aa19.46■□□□□ 0.71
SNX16-203ENST00000396330 TRIM26Q12899 539 aaPredicted RBP19.45■□□□□ 0.7
SNX16-203ENST00000396330 BAZ1AQ9NRL2 1556 aaPredicted RBP19.31■□□□□ 0.68
SNX16-203ENST00000396330 UBTFP17480 764 aaKnown RBP19.25■□□□□ 0.67
SNX16-203ENST00000396330 RANGAP1P46060 587 aaPredicted RBP19.23■□□□□ 0.67
SNX16-203ENST00000396330 CCDC88BA6NC98 1476 aa19.14■□□□□ 0.65
SNX16-203ENST00000396330 ABCC8Q09428 1581 aa19.12■□□□□ 0.65
SNX16-203ENST00000396330 SMARCA4P51532 1647 aa19.1■□□□□ 0.65
SNX16-203ENST00000396330 TOP2AP11388 1531 aaKnown RBP19.04■□□□□ 0.64
SNX16-203ENST00000396330 UNC13AQ9UPW8 1703 aa19.01■□□□□ 0.63
SNX16-203ENST00000396330 CSRNP3Q8WYN3 585 aa19■□□□□ 0.63
SNX16-203ENST00000396330 SOGA1O94964 1423 aa18.97■□□□□ 0.63
SNX16-203ENST00000396330 CCER1Q8TC90 406 aaPredicted RBP18.96■□□□□ 0.63
SNX16-203ENST00000396330 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.95■□□□□ 0.62
SNX16-203ENST00000396330 SMARCA2P51531 1590 aa18.94■□□□□ 0.62
SNX16-203ENST00000396330 ZEB1P37275 1124 aaPredicted RBP18.92■□□□□ 0.62
SNX16-203ENST00000396330 BICRAQ9NZM4 1560 aa18.9■□□□□ 0.62
SNX16-203ENST00000396330 BAZ1BQ9UIG0 1483 aaKnown RBP18.87■□□□□ 0.61
SNX16-203ENST00000396330 WRNQ14191 1432 aaPredicted RBP eCLIP18.85■□□□□ 0.61
SNX16-203ENST00000396330 RUSC2Q8N2Y8 1516 aa18.84■□□□□ 0.61
SNX16-203ENST00000396330 APLP2Q06481 763 aa18.84■□□□□ 0.61
SNX16-203ENST00000396330 ATAD2BQ9ULI0 1458 aa18.79■□□□□ 0.6
SNX16-203ENST00000396330 CEP162Q5TB80 1403 aa18.78■□□□□ 0.6
SNX16-203ENST00000396330 HNRNPUL2Q1KMD3 747 aaKnown RBP18.73■□□□□ 0.59
SNX16-203ENST00000396330 EIF4G1Q04637 1599 aaKnown RBP18.69■□□□□ 0.58
SNX16-203ENST00000396330 TNIKQ9UKE5 1360 aa18.66■□□□□ 0.58
SNX16-203ENST00000396330 EEA1Q15075 1411 aa18.63■□□□□ 0.57
SNX16-203ENST00000396330 GOLGA3Q08378 1498 aa18.62■□□□□ 0.57
SNX16-203ENST00000396330 CLIP1P30622 1438 aa18.54■□□□□ 0.56
SNX16-203ENST00000396330 SYNJ1O43426 1573 aa18.54■□□□□ 0.56
SNX16-203ENST00000396330 ATP1B4Q9UN42 357 aaPredicted RBP18.53■□□□□ 0.56
SNX16-203ENST00000396330 CEP164Q9UPV0 1460 aa18.51■□□□□ 0.55
SNX16-203ENST00000396330 PEG3Q9GZU2 1588 aa18.48■□□□□ 0.55
SNX16-203ENST00000396330 ITGAEP38570 1179 aa18.47■□□□□ 0.55
SNX16-203ENST00000396330 RAPGEF2Q9Y4G8 1499 aa18.46■□□□□ 0.54
SNX16-203ENST00000396330 P3H3Q8IVL6 736 aa18.38■□□□□ 0.53
SNX16-203ENST00000396330 NCAPD3P42695 1498 aa18.37■□□□□ 0.53
SNX16-203ENST00000396330 DIEXFQ68CQ4 756 aaKnown RBP18.32■□□□□ 0.52
SNX16-203ENST00000396330 KIF27Q86VH2 1401 aa18.31■□□□□ 0.52
SNX16-203ENST00000396330 VPS8Q8N3P4 1428 aa18.29■□□□□ 0.52
SNX16-203ENST00000396330 KANK4Q5T7N3 995 aaPredicted RBP18.24■□□□□ 0.51
SNX16-203ENST00000396330 CUX2O14529 1486 aa18.24■□□□□ 0.51
SNX16-203ENST00000396330 TOP2BQ02880 1626 aa18.23■□□□□ 0.51
SNX16-203ENST00000396330 YTHDC1Q96MU7 727 aaKnown RBP18.22■□□□□ 0.51
SNX16-203ENST00000396330 CADPSQ9ULU8 1353 aa18.22■□□□□ 0.51
SNX16-203ENST00000396330 CUX1P39880 1505 aa18.22■□□□□ 0.51
SNX16-203ENST00000396330 HMGXB3Q12766 1538 aa18.21■□□□□ 0.51
SNX16-203ENST00000396330 KIF21BO75037 1637 aa18.21■□□□□ 0.51
SNX16-203ENST00000396330 CFTRP13569 1480 aa18.2■□□□□ 0.5
SNX16-203ENST00000396330 FAM50AQ14320 339 aaKnown RBP18.15■□□□□ 0.5
SNX16-203ENST00000396330 ZNF316A6NFI3 1004 aaPredicted RBP18.14■□□□□ 0.49
SNX16-203ENST00000396330 CARMIL1Q5VZK9 1371 aa18.11■□□□□ 0.49
SNX16-203ENST00000396330 PRXQ9BXM0 1461 aa18.09■□□□□ 0.49
SNX16-203ENST00000396330 CC2D2AQ9P2K1 1620 aa18.09■□□□□ 0.49
SNX16-203ENST00000396330 DNAJC5BQ9UF47 199 aa18.07■□□□□ 0.48
SNX16-203ENST00000396330 IGF1RP08069 1367 aa18.07■□□□□ 0.48
SNX16-203ENST00000396330 FGD5Q6ZNL6 1462 aa18.06■□□□□ 0.48
SNX16-203ENST00000396330 NESP48681 1621 aa18.05■□□□□ 0.48
SNX16-203ENST00000396330 ARAP1Q96P48 1450 aa18.04■□□□□ 0.48
SNX16-203ENST00000396330 FANCD2Q9BXW9 1451 aa18.04■□□□□ 0.48
SNX16-203ENST00000396330 BIVM-ERCC5R4GMW8 1640 aa18.04■□□□□ 0.48
SNX16-203ENST00000396330 CENPBP07199 599 aaPredicted RBP18.04■□□□□ 0.48
SNX16-203ENST00000396330 RAD54L2Q9Y4B4 1467 aa18.01■□□□□ 0.47
SNX16-203ENST00000396330 ARID3CA6NKF2 412 aa18.01■□□□□ 0.47
SNX16-203ENST00000396330 ERICH3Q5RHP9 1530 aa17.98■□□□□ 0.47
SNX16-203ENST00000396330 SCAF1Q9H7N4 1312 aaKnown RBP17.97■□□□□ 0.47
SNX16-203ENST00000396330 TDRD9Q8NDG6 1382 aaKnown RBP17.97■□□□□ 0.47
SNX16-203ENST00000396330 NEUROD1Q13562 356 aa17.96■□□□□ 0.47
SNX16-203ENST00000396330 ARHGAP35Q9NRY4 1499 aa17.94■□□□□ 0.46
SNX16-203ENST00000396330 CCNB3Q8WWL7 1395 aa17.91■□□□□ 0.46
SNX16-203ENST00000396330 MIER1Q8N108 512 aa17.91■□□□□ 0.46
SNX16-203ENST00000396330 ACIN1Q9UKV3 1341 aaKnown RBP17.9■□□□□ 0.46
SNX16-203ENST00000396330 FHOD3Q2V2M9 1422 aa17.88■□□□□ 0.45
SNX16-203ENST00000396330 GTF3C3Q9Y5Q9 886 aa17.86■□□□□ 0.45
SNX16-203ENST00000396330 POLA1P09884 1462 aaPredicted RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms