Protein–RNA interactions for Protein: P13796

LCP1, Plastin-2, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCP1P13796 ZNF461-201ENST00000360357 2361 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
LCP1P13796 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
LCP1P13796 ACOT11-201ENST00000343744 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LCP1P13796 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC13.14□□□□□ -0.31
LCP1P13796 JPT2-206ENST00000562684 3185 ntTSL 2 BASIC13.14□□□□□ -0.31
LCP1P13796 TUBAL3-202ENST00000479328 1505 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LCP1P13796 AL021408.2-201ENST00000624196 1544 ntBASIC13.13□□□□□ -0.31
LCP1P13796 CDCA7L-202ENST00000373934 1830 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
LCP1P13796 MMP19-206ENST00000548629 1813 ntTSL 5 BASIC13.13□□□□□ -0.31
LCP1P13796 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC13.13□□□□□ -0.31
LCP1P13796 AS3MT-201ENST00000369880 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCP1P13796 DCAF6-204ENST00000432587 3522 ntTSL 2 BASIC13.13□□□□□ -0.31
LCP1P13796 PCDHGA2-202ENST00000528330 4543 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
LCP1P13796 BTBD3-203ENST00000399006 4826 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
LCP1P13796 VPS16-202ENST00000380445 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCP1P13796 AC018521.1-202ENST00000641877 2655 ntBASIC13.13□□□□□ -0.31
LCP1P13796 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
LCP1P13796 AL355388.2-201ENST00000610146 2157 ntTSL 4 BASIC13.13□□□□□ -0.31
LCP1P13796 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCP1P13796 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LCP1P13796 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCP1P13796 MARCH5-201ENST00000358935 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCP1P13796 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCP1P13796 FAM96A-201ENST00000300030 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCP1P13796 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC13.13□□□□□ -0.31
LCP1P13796 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LCP1P13796 AL357373.1-201ENST00000394974 322 ntBASIC13.13□□□□□ -0.31
LCP1P13796 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC13.13□□□□□ -0.31
LCP1P13796 SKA1-203ENST00000417656 1095 ntTSL 2 BASIC13.13□□□□□ -0.31
LCP1P13796 RRM2P2-201ENST00000436212 652 ntBASIC13.13□□□□□ -0.31
LCP1P13796 AL353803.1-201ENST00000439014 800 ntTSL 2 BASIC13.13□□□□□ -0.31
LCP1P13796 CDCA4P3-201ENST00000442572 689 ntBASIC13.13□□□□□ -0.31
LCP1P13796 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC13.13□□□□□ -0.31
LCP1P13796 TGFA-207ENST00000450929 950 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LCP1P13796 AC005996.2-201ENST00000465549 564 ntTSL 4 BASIC13.13□□□□□ -0.31
LCP1P13796 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC13.13□□□□□ -0.31
LCP1P13796 AC011431.1-201ENST00000512971 230 ntBASIC13.13□□□□□ -0.31
LCP1P13796 OR52V1P-201ENST00000515557 898 ntBASIC13.13□□□□□ -0.31
LCP1P13796 AC002519.2-201ENST00000563575 539 ntTSL 4 BASIC13.13□□□□□ -0.31
LCP1P13796 AC004702.1-201ENST00000580225 195 ntTSL 5 BASIC13.13□□□□□ -0.31
LCP1P13796 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC13.13□□□□□ -0.31
LCP1P13796 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC13.13□□□□□ -0.31
LCP1P13796 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCP1P13796 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCP1P13796 AL139011.2-201ENST00000556710 2635 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
LCP1P13796 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
LCP1P13796 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCP1P13796 ZNF221-202ENST00000587682 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCP1P13796 LINC01532-202ENST00000591143 1948 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LCP1P13796 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCP1P13796 FBLN2-201ENST00000295760 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCP1P13796 POLL-203ENST00000370162 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCP1P13796 KCNMB3-203ENST00000392685 1608 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LCP1P13796 PRRG4-201ENST00000257836 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCP1P13796 CICP7-201ENST00000432723 2477 ntBASIC13.13□□□□□ -0.31
LCP1P13796 INAVA-201ENST00000367342 4298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCP1P13796 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCP1P13796 ARHGEF9-221ENST00000635967 2179 ntTSL 5 BASIC13.13□□□□□ -0.31
LCP1P13796 PCDHGA8-202ENST00000610569 6480 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
LCP1P13796 BRF2-201ENST00000220659 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCP1P13796 STX16-202ENST00000355957 4897 ntTSL 2 BASIC13.12□□□□□ -0.31
LCP1P13796 MAN2B1-201ENST00000221363 3170 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCP1P13796 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCP1P13796 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LCP1P13796 ANKRD42-203ENST00000393392 2302 ntTSL 2 BASIC13.12□□□□□ -0.31
LCP1P13796 CU639417.6-202ENST00000624872 3241 ntTSL 5 BASIC13.12□□□□□ -0.31
LCP1P13796 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
LCP1P13796 SLIT2-201ENST00000273739 5132 ntTSL 5 BASIC13.12□□□□□ -0.31
LCP1P13796 CAPN10-AS1-201ENST00000567819 4000 ntBASIC13.12□□□□□ -0.31
LCP1P13796 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LCP1P13796 NF2-204ENST00000361166 1837 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCP1P13796 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCP1P13796 POPDC2-208ENST00000493094 1837 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
LCP1P13796 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCP1P13796 NDUFB8-203ENST00000370322 713 ntTSL 2 BASIC13.12□□□□□ -0.31
LCP1P13796 SNAPC5-203ENST00000395589 749 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
LCP1P13796 TXNRD3NB-201ENST00000404489 738 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCP1P13796 MED15P3-201ENST00000413613 326 ntBASIC13.12□□□□□ -0.31
LCP1P13796 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LCP1P13796 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LCP1P13796 HTR3D-203ENST00000428798 1215 ntTSL 5 BASIC13.12□□□□□ -0.31
LCP1P13796 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC13.12□□□□□ -0.31
LCP1P13796 U62317.1-201ENST00000434237 157 ntTSL 3 BASIC13.12□□□□□ -0.31
LCP1P13796 AL663070.1-201ENST00000438210 725 ntBASIC13.12□□□□□ -0.31
LCP1P13796 AC046143.1-201ENST00000447139 972 ntTSL 2 BASIC13.12□□□□□ -0.31
LCP1P13796 HTR3D-204ENST00000453435 1043 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LCP1P13796 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC13.12□□□□□ -0.31
LCP1P13796 CETN3-205ENST00000522842 664 ntTSL 2 BASIC13.12□□□□□ -0.31
LCP1P13796 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
LCP1P13796 NPIPP1-202ENST00000534799 1214 ntTSL 3 BASIC13.12□□□□□ -0.31
LCP1P13796 SNAPC5-205ENST00000563480 920 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
LCP1P13796 AC009166.1-201ENST00000570060 487 ntTSL 2 BASIC13.12□□□□□ -0.31
LCP1P13796 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC13.12□□□□□ -0.31
LCP1P13796 CORO7-PAM16-202ENST00000572467 3284 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
LCP1P13796 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCP1P13796 ACTG1-216ENST00000615544 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCP1P13796 ABHD17B-201ENST00000333421 2614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCP1P13796 TRPV1-204ENST00000425167 2607 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LCP1P13796 SPOCK3-203ENST00000421836 3061 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
LCP1P13796 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms