Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAF6Q9Y4K3 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAF6Q9Y4K3 GMPR2-202ENST00000355299 1972 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAF6Q9Y4K3 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAF6Q9Y4K3 SIRPB3P-201ENST00000340424 1216 ntBASIC12.22□□□□□ -0.45
TRAF6Q9Y4K3 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRAF6Q9Y4K3 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
TRAF6Q9Y4K3 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRAF6Q9Y4K3 STK16-203ENST00000409516 895 ntTSL 2 BASIC12.22□□□□□ -0.45
TRAF6Q9Y4K3 SLC25A6P3-201ENST00000424829 879 ntBASIC12.22□□□□□ -0.45
TRAF6Q9Y4K3 CYP2F2P-201ENST00000437853 1056 ntBASIC12.22□□□□□ -0.45
TRAF6Q9Y4K3 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAF6Q9Y4K3 AQP7-207ENST00000447660 998 ntTSL 2 BASIC12.22□□□□□ -0.45
TRAF6Q9Y4K3 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC12.22□□□□□ -0.45
TRAF6Q9Y4K3 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC12.22□□□□□ -0.45
TRAF6Q9Y4K3 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC12.22□□□□□ -0.45
TRAF6Q9Y4K3 RETN-203ENST00000629642 400 ntTSL 5 BASIC12.22□□□□□ -0.45
TRAF6Q9Y4K3 HERC6-203ENST00000380265 3781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAF6Q9Y4K3 FKBP4-201ENST00000001008 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAF6Q9Y4K3 OSBP2-203ENST00000403222 3728 ntTSL 5 BASIC12.22□□□□□ -0.45
TRAF6Q9Y4K3 ST5-207ENST00000526099 2404 ntTSL 2 BASIC12.22□□□□□ -0.45
TRAF6Q9Y4K3 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAF6Q9Y4K3 ANKRD42-203ENST00000393392 2302 ntTSL 2 BASIC12.22□□□□□ -0.45
TRAF6Q9Y4K3 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRAF6Q9Y4K3 CD1E-208ENST00000368163 1678 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRAF6Q9Y4K3 LDLRAD1-204ENST00000545928 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAF6Q9Y4K3 SIRPA-201ENST00000356025 3867 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAF6Q9Y4K3 HS6ST2-202ENST00000370836 4441 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
TRAF6Q9Y4K3 TK2-206ENST00000527800 2687 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRAF6Q9Y4K3 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
TRAF6Q9Y4K3 AKAP1-208ENST00000572557 3098 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
TRAF6Q9Y4K3 AP005242.4-201ENST00000623533 2529 ntBASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 IST1-219ENST00000541571 1962 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 ATP7B-203ENST00000400366 6304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 CFAP43-204ENST00000369720 2876 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 RNF144A-AS1-201ENST00000418970 2374 ntTSL 5 BASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 SHOX-203ENST00000381578 3757 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 PLEKHG5-208ENST00000400915 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 METAP2-209ENST00000550777 1779 ntTSL 5 BASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 PALM2-201ENST00000314527 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 ABCB8-222ENST00000542328 4371 ntTSL 2 BASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 LRP1-207ENST00000554174 2175 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 AL353616.2-201ENST00000413269 1739 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 DUXAP8-202ENST00000413768 2102 ntTSL 2 BASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 AL078621.2-201ENST00000419351 698 ntBASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 AL358876.2-201ENST00000424689 477 ntTSL 3 BASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 AL357558.2-201ENST00000431915 425 ntTSL 2 BASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 AC008267.1-201ENST00000474858 1069 ntBASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 ALG1L3P-201ENST00000503331 765 ntBASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 AP003108.1-201ENST00000534856 554 ntTSL 4 BASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 F11R-204ENST00000537746 1245 ntTSL 2 BASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 AP001453.2-201ENST00000544553 391 ntTSL 2 BASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 GPATCH2L-209ENST00000556663 2112 ntTSL 2 BASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 MIR4722-201ENST00000578292 60 ntBASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 LINC02348-201ENST00000618724 489 ntTSL 4 BASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 MIR6746-201ENST00000620971 63 ntBASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 STIM1-218ENST00000533977 2080 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 PPIL2-201ENST00000335025 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAF6Q9Y4K3 TAF5L-203ENST00000366675 4062 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TRAF6Q9Y4K3 LINC01122-207ENST00000452840 4077 ntTSL 5 BASIC12.21□□□□□ -0.46
TRAF6Q9Y4K3 AP001469.3-202ENST00000430259 2014 ntTSL 5 BASIC12.21□□□□□ -0.46
TRAF6Q9Y4K3 DOCK10-201ENST00000258390 7260 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
TRAF6Q9Y4K3 RFC3-201ENST00000380071 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRAF6Q9Y4K3 PLSCR4-203ENST00000433593 2839 ntTSL 2 BASIC12.21□□□□□ -0.46
TRAF6Q9Y4K3 SLC5A10-201ENST00000317977 4436 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TRAF6Q9Y4K3 ZFAT-202ENST00000429442 4421 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TRAF6Q9Y4K3 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
TRAF6Q9Y4K3 BX005132.1-201ENST00000641403 1580 ntBASIC12.21□□□□□ -0.46
TRAF6Q9Y4K3 SPTY2D1-201ENST00000336349 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRAF6Q9Y4K3 SPOP-205ENST00000503676 1932 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
TRAF6Q9Y4K3 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRAF6Q9Y4K3 CLIP3-201ENST00000360535 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRAF6Q9Y4K3 ISM2-202ENST00000342219 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRAF6Q9Y4K3 MAGEA11-201ENST00000333104 1845 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
TRAF6Q9Y4K3 SHMT2-201ENST00000328923 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAF6Q9Y4K3 TADA2B-205ENST00000515646 3818 ntBASIC12.2□□□□□ -0.46
TRAF6Q9Y4K3 DCAF11-203ENST00000396941 2402 ntTSL 2 BASIC12.2□□□□□ -0.46
TRAF6Q9Y4K3 NUAK2-201ENST00000367157 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAF6Q9Y4K3 CFAP36-202ENST00000349456 2048 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAF6Q9Y4K3 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAF6Q9Y4K3 SGCE-201ENST00000265735 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAF6Q9Y4K3 SGK1-220ENST00000524929 2594 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRAF6Q9Y4K3 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAF6Q9Y4K3 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAF6Q9Y4K3 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAF6Q9Y4K3 NR0B1-201ENST00000378963 475 ntTSL 2 BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms