Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 CACYBPP3-201ENST00000406011 625 ntBASIC13.11□□□□□ -0.31
SLC1A1P43005 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC13.11□□□□□ -0.31
SLC1A1P43005 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC13.11□□□□□ -0.31
SLC1A1P43005 AL451000.1-201ENST00000451300 1186 ntBASIC13.11□□□□□ -0.31
SLC1A1P43005 HNRNPA3P6-201ENST00000472163 1006 ntBASIC13.11□□□□□ -0.31
SLC1A1P43005 AC022447.7-201ENST00000509629 435 ntBASIC13.11□□□□□ -0.31
SLC1A1P43005 SCAMP1-AS1-202ENST00000513755 493 ntTSL 2 BASIC13.11□□□□□ -0.31
SLC1A1P43005 VEGFA-224ENST00000523873 784 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SLC1A1P43005 BBOX1-AS1-203ENST00000530430 879 ntTSL 4 BASIC13.11□□□□□ -0.31
SLC1A1P43005 BBOX1-AS1-204ENST00000531363 745 ntTSL 2 BASIC13.11□□□□□ -0.31
SLC1A1P43005 ZNF970P-201ENST00000547456 223 ntBASIC13.11□□□□□ -0.31
SLC1A1P43005 AC233702.8-201ENST00000579239 965 ntTSL 3 BASIC13.11□□□□□ -0.31
SLC1A1P43005 AC090844.3-201ENST00000583462 784 ntTSL 3 BASIC13.11□□□□□ -0.31
SLC1A1P43005 AC005746.1-202ENST00000585495 716 ntTSL 5 BASIC13.11□□□□□ -0.31
SLC1A1P43005 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC13.11□□□□□ -0.31
SLC1A1P43005 AC091941.1-201ENST00000623003 576 ntBASIC13.11□□□□□ -0.31
SLC1A1P43005 AC016526.4-201ENST00000636059 517 ntTSL 3 BASIC13.11□□□□□ -0.31
SLC1A1P43005 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SLC1A1P43005 AP000553.4-201ENST00000641967 471 ntBASIC13.11□□□□□ -0.31
SLC1A1P43005 CPT1A-205ENST00000539743 2382 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
SLC1A1P43005 UBR4-203ENST00000375225 1533 ntTSL 2 BASIC13.11□□□□□ -0.31
SLC1A1P43005 GPT2-202ENST00000440783 4228 ntTSL 2 BASIC13.11□□□□□ -0.31
SLC1A1P43005 CHST9-201ENST00000580774 2033 ntTSL 3 BASIC13.11□□□□□ -0.31
SLC1A1P43005 CAPN10-AS1-201ENST00000567819 4000 ntBASIC13.11□□□□□ -0.31
SLC1A1P43005 EFNA1-201ENST00000368406 1444 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SLC1A1P43005 ANKRD27-204ENST00000587352 3301 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SLC1A1P43005 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SLC1A1P43005 RPUSD4-208ENST00000533628 2053 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SLC1A1P43005 RPH3A-202ENST00000415485 4452 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SLC1A1P43005 CLINT1-206ENST00000523094 3987 ntTSL 2 BASIC13.11□□□□□ -0.31
SLC1A1P43005 HAUS6-202ENST00000380502 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SLC1A1P43005 ZNF114-201ENST00000315849 2206 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
SLC1A1P43005 FLCN-201ENST00000285071 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SLC1A1P43005 CDH3-202ENST00000429102 3611 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SLC1A1P43005 ZP1-201ENST00000278853 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SLC1A1P43005 PLEKHG6-204ENST00000449001 3111 ntTSL 2 BASIC13.11□□□□□ -0.31
SLC1A1P43005 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC13.1□□□□□ -0.31
SLC1A1P43005 KIAA0319L-202ENST00000373266 2377 ntTSL 5 BASIC13.1□□□□□ -0.31
SLC1A1P43005 PMS1-204ENST00000409823 2795 ntTSL 5 BASIC13.1□□□□□ -0.31
SLC1A1P43005 CHMP3-204ENST00000409727 1851 ntTSL 2 BASIC13.1□□□□□ -0.31
SLC1A1P43005 MSANTD4-201ENST00000301919 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SLC1A1P43005 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SLC1A1P43005 SLITRK3-201ENST00000241274 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SLC1A1P43005 TP53I11-220ENST00000533940 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SLC1A1P43005 FAN1-201ENST00000362065 4891 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SLC1A1P43005 BCAR1-203ENST00000393422 4064 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
SLC1A1P43005 CHID1-205ENST00000454838 3255 ntTSL 5 BASIC13.1□□□□□ -0.31
SLC1A1P43005 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SLC1A1P43005 MMP2-202ENST00000437642 2469 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SLC1A1P43005 UCK1-202ENST00000372210 2051 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SLC1A1P43005 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC13.1□□□□□ -0.31
SLC1A1P43005 HNRNPA1P10-201ENST00000444945 962 ntBASIC13.1□□□□□ -0.31
SLC1A1P43005 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC13.1□□□□□ -0.31
SLC1A1P43005 AC026410.1-201ENST00000507366 1101 ntBASIC13.1□□□□□ -0.31
SLC1A1P43005 ARHGEF4-212ENST00000525839 3828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SLC1A1P43005 LINC01206-212ENST00000609168 988 ntTSL 5 BASIC13.1□□□□□ -0.31
SLC1A1P43005 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC13.1□□□□□ -0.31
SLC1A1P43005 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC13.1□□□□□ -0.31
SLC1A1P43005 ST5-201ENST00000313726 4507 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
SLC1A1P43005 STAG1-203ENST00000434713 5064 ntTSL 5 BASIC13.1□□□□□ -0.31
SLC1A1P43005 INVS-202ENST00000262457 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SLC1A1P43005 PRKG2-201ENST00000264399 4822 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SLC1A1P43005 CYP20A1-210ENST00000613925 1986 ntTSL 2 BASIC13.1□□□□□ -0.31
SLC1A1P43005 FGFR1OP-207ENST00000622353 3451 ntTSL 2 BASIC13.1□□□□□ -0.31
SLC1A1P43005 TAS1R2-201ENST00000375371 2542 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
SLC1A1P43005 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SLC1A1P43005 DUXAP8-202ENST00000413768 2102 ntTSL 2 BASIC13.1□□□□□ -0.31
SLC1A1P43005 ANKRD20A8P-201ENST00000432432 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SLC1A1P43005 ST5-207ENST00000526099 2404 ntTSL 2 BASIC13.1□□□□□ -0.31
SLC1A1P43005 ATP13A2-201ENST00000326735 3840 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SLC1A1P43005 DHRS12-202ENST00000280056 1324 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SLC1A1P43005 MATN2-218ENST00000524308 3449 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SLC1A1P43005 TSKU-203ENST00000527881 3554 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
SLC1A1P43005 NUP62-201ENST00000352066 2870 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SLC1A1P43005 SNRNP48-201ENST00000342415 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SLC1A1P43005 PAMR1-205ENST00000611014 2613 ntTSL 5 BASIC13.09□□□□□ -0.31
SLC1A1P43005 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
SLC1A1P43005 SERPINH1-202ENST00000524558 3391 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
SLC1A1P43005 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SLC1A1P43005 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC13.09□□□□□ -0.31
SLC1A1P43005 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC13.09□□□□□ -0.31
SLC1A1P43005 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SLC1A1P43005 TGFBI-201ENST00000442011 2804 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SLC1A1P43005 MASTL-201ENST00000342386 2968 ntTSL 2 BASIC13.09□□□□□ -0.31
SLC1A1P43005 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
SLC1A1P43005 SMN1-202ENST00000380707 1536 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SLC1A1P43005 SMN2-203ENST00000380743 1536 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
SLC1A1P43005 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SLC1A1P43005 ALG8-201ENST00000299626 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SLC1A1P43005 BHLHB9P1-201ENST00000553845 1651 ntBASIC13.09□□□□□ -0.31
SLC1A1P43005 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC13.09□□□□□ -0.31
SLC1A1P43005 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
SLC1A1P43005 FAM13C-201ENST00000422313 1963 ntTSL 5 BASIC13.09□□□□□ -0.31
SLC1A1P43005 MAMLD1-201ENST00000262858 4607 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
SLC1A1P43005 CHMP3-201ENST00000263856 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SLC1A1P43005 PALLD-209ENST00000507735 4379 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SLC1A1P43005 TYR-201ENST00000263321 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SLC1A1P43005 CFAP36-202ENST00000349456 2048 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SLC1A1P43005 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SLC1A1P43005 PGAM1P11-201ENST00000416729 680 ntBASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms