Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCM2LQ9NUG4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCM2LQ9NUG4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.64■□□□□ 0.89
CCM2LQ9NUG4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCM2LQ9NUG4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CCM2LQ9NUG4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCM2LQ9NUG4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.63■□□□□ 0.89
CCM2LQ9NUG4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCM2LQ9NUG4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCM2LQ9NUG4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.63■□□□□ 0.89
CCM2LQ9NUG4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CCM2LQ9NUG4 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCM2LQ9NUG4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCM2LQ9NUG4 AC144652.1-201ENST00000609974 1624 ntBASIC20.63■□□□□ 0.89
CCM2LQ9NUG4 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.62■□□□□ 0.89
CCM2LQ9NUG4 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.62■□□□□ 0.89
CCM2LQ9NUG4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCM2LQ9NUG4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCM2LQ9NUG4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCM2LQ9NUG4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCM2LQ9NUG4 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCM2LQ9NUG4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CCM2LQ9NUG4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CCM2LQ9NUG4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCM2LQ9NUG4 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCM2LQ9NUG4 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
CCM2LQ9NUG4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.62■□□□□ 0.89
CCM2LQ9NUG4 AC131281.2-201ENST00000520478 145 ntBASIC20.62■□□□□ 0.89
CCM2LQ9NUG4 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.62■□□□□ 0.89
CCM2LQ9NUG4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.62■□□□□ 0.89
CCM2LQ9NUG4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CCM2LQ9NUG4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCM2LQ9NUG4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCM2LQ9NUG4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCM2LQ9NUG4 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
CCM2LQ9NUG4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCM2LQ9NUG4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCM2LQ9NUG4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCM2LQ9NUG4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCM2LQ9NUG4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCM2LQ9NUG4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCM2LQ9NUG4 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.61■□□□□ 0.89
CCM2LQ9NUG4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.61■□□□□ 0.89
CCM2LQ9NUG4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.61■□□□□ 0.89
CCM2LQ9NUG4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCM2LQ9NUG4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCM2LQ9NUG4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCM2LQ9NUG4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
CCM2LQ9NUG4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.61■□□□□ 0.89
CCM2LQ9NUG4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.6■□□□□ 0.89
CCM2LQ9NUG4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCM2LQ9NUG4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCM2LQ9NUG4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
CCM2LQ9NUG4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.6■□□□□ 0.89
CCM2LQ9NUG4 KRT18P24-201ENST00000344739 1156 ntBASIC20.6■□□□□ 0.89
CCM2LQ9NUG4 AL136116.3-201ENST00000402907 1138 ntBASIC20.6■□□□□ 0.89
CCM2LQ9NUG4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.6■□□□□ 0.89
CCM2LQ9NUG4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.6■□□□□ 0.89
CCM2LQ9NUG4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CCM2LQ9NUG4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CCM2LQ9NUG4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCM2LQ9NUG4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCM2LQ9NUG4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCM2LQ9NUG4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
CCM2LQ9NUG4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCM2LQ9NUG4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.6■□□□□ 0.89
CCM2LQ9NUG4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CCM2LQ9NUG4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCM2LQ9NUG4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCM2LQ9NUG4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCM2LQ9NUG4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CCM2LQ9NUG4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCM2LQ9NUG4 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.59■□□□□ 0.89
CCM2LQ9NUG4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCM2LQ9NUG4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.59■□□□□ 0.89
CCM2LQ9NUG4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCM2LQ9NUG4 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.59■□□□□ 0.89
CCM2LQ9NUG4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCM2LQ9NUG4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.59■□□□□ 0.89
CCM2LQ9NUG4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCM2LQ9NUG4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.59■□□□□ 0.89
CCM2LQ9NUG4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCM2LQ9NUG4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CCM2LQ9NUG4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCM2LQ9NUG4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.58■□□□□ 0.89
CCM2LQ9NUG4 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCM2LQ9NUG4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.58■□□□□ 0.89
CCM2LQ9NUG4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCM2LQ9NUG4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCM2LQ9NUG4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCM2LQ9NUG4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CCM2LQ9NUG4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCM2LQ9NUG4 AC004448.1-201ENST00000458332 883 ntBASIC20.58■□□□□ 0.89
CCM2LQ9NUG4 AC137630.3-201ENST00000607245 391 ntBASIC20.58■□□□□ 0.89
CCM2LQ9NUG4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCM2LQ9NUG4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CCM2LQ9NUG4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.57■□□□□ 0.88
CCM2LQ9NUG4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.57■□□□□ 0.88
CCM2LQ9NUG4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCM2LQ9NUG4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms