Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
LIN28AQ9H9Z2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LIN28AQ9H9Z2 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LIN28AQ9H9Z2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LIN28AQ9H9Z2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LIN28AQ9H9Z2 AC024257.2-201ENST00000549699 147 ntBASIC20.79■□□□□ 0.92
LIN28AQ9H9Z2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.79■□□□□ 0.92
LIN28AQ9H9Z2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LIN28AQ9H9Z2 SYT6-210ENST00000641643 1587 ntBASIC20.79■□□□□ 0.92
LIN28AQ9H9Z2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.79■□□□□ 0.92
LIN28AQ9H9Z2 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.79■□□□□ 0.92
LIN28AQ9H9Z2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LIN28AQ9H9Z2 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.78■□□□□ 0.92
LIN28AQ9H9Z2 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.78■□□□□ 0.92
LIN28AQ9H9Z2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LIN28AQ9H9Z2 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.78■□□□□ 0.92
LIN28AQ9H9Z2 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
LIN28AQ9H9Z2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
LIN28AQ9H9Z2 AC092667.1-201ENST00000434301 2586 ntBASIC20.78■□□□□ 0.92
LIN28AQ9H9Z2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LIN28AQ9H9Z2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LIN28AQ9H9Z2 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.78■□□□□ 0.92
LIN28AQ9H9Z2 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
LIN28AQ9H9Z2 SERBP1P1-201ENST00000396021 1160 ntBASIC20.78■□□□□ 0.92
LIN28AQ9H9Z2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LIN28AQ9H9Z2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.78■□□□□ 0.92
LIN28AQ9H9Z2 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LIN28AQ9H9Z2 AC009086.3-201ENST00000623486 1008 ntBASIC20.78■□□□□ 0.92
LIN28AQ9H9Z2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LIN28AQ9H9Z2 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
LIN28AQ9H9Z2 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.78■□□□□ 0.92
LIN28AQ9H9Z2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
LIN28AQ9H9Z2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
LIN28AQ9H9Z2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
LIN28AQ9H9Z2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
LIN28AQ9H9Z2 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
LIN28AQ9H9Z2 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LIN28AQ9H9Z2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LIN28AQ9H9Z2 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LIN28AQ9H9Z2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
LIN28AQ9H9Z2 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LIN28AQ9H9Z2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LIN28AQ9H9Z2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LIN28AQ9H9Z2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LIN28AQ9H9Z2 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
LIN28AQ9H9Z2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
LIN28AQ9H9Z2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
LIN28AQ9H9Z2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LIN28AQ9H9Z2 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LIN28AQ9H9Z2 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
LIN28AQ9H9Z2 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.76■□□□□ 0.91
LIN28AQ9H9Z2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.76■□□□□ 0.91
LIN28AQ9H9Z2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.76■□□□□ 0.91
LIN28AQ9H9Z2 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.76■□□□□ 0.91
LIN28AQ9H9Z2 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LIN28AQ9H9Z2 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.76■□□□□ 0.91
LIN28AQ9H9Z2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.76■□□□□ 0.91
LIN28AQ9H9Z2 AC106739.1-201ENST00000617035 715 ntBASIC20.76■□□□□ 0.91
LIN28AQ9H9Z2 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LIN28AQ9H9Z2 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LIN28AQ9H9Z2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.76■□□□□ 0.91
LIN28AQ9H9Z2 AC135279.3-201ENST00000610945 1311 ntBASIC20.76■□□□□ 0.91
LIN28AQ9H9Z2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LIN28AQ9H9Z2 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.76■□□□□ 0.91
LIN28AQ9H9Z2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LIN28AQ9H9Z2 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LIN28AQ9H9Z2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
LIN28AQ9H9Z2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
LIN28AQ9H9Z2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.75■□□□□ 0.91
LIN28AQ9H9Z2 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LIN28AQ9H9Z2 AC241377.3-202ENST00000626088 1088 ntBASIC20.75■□□□□ 0.91
LIN28AQ9H9Z2 AC241585.3-202ENST00000628937 1088 ntBASIC20.75■□□□□ 0.91
LIN28AQ9H9Z2 AC245100.8-202ENST00000629247 1058 ntBASIC20.75■□□□□ 0.91
LIN28AQ9H9Z2 AC079630.1-202ENST00000618127 1840 ntBASIC20.75■□□□□ 0.91
LIN28AQ9H9Z2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.75■□□□□ 0.91
LIN28AQ9H9Z2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LIN28AQ9H9Z2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.75■□□□□ 0.91
LIN28AQ9H9Z2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
LIN28AQ9H9Z2 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LIN28AQ9H9Z2 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LIN28AQ9H9Z2 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.74■□□□□ 0.91
LIN28AQ9H9Z2 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LIN28AQ9H9Z2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LIN28AQ9H9Z2 DUX4L19-201ENST00000557448 1267 ntBASIC20.74■□□□□ 0.91
LIN28AQ9H9Z2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
LIN28AQ9H9Z2 AC092171.4-201ENST00000609130 632 ntBASIC20.74■□□□□ 0.91
LIN28AQ9H9Z2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.74■□□□□ 0.91
LIN28AQ9H9Z2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LIN28AQ9H9Z2 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LIN28AQ9H9Z2 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
LIN28AQ9H9Z2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
LIN28AQ9H9Z2 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LIN28AQ9H9Z2 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.74■□□□□ 0.91
LIN28AQ9H9Z2 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LIN28AQ9H9Z2 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
LIN28AQ9H9Z2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
LIN28AQ9H9Z2 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
LIN28AQ9H9Z2 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LIN28AQ9H9Z2 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LIN28AQ9H9Z2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms