Protein–RNA interactions for Protein: Q9H320

VCX, Variable charge X-linked protein 1, humanhuman

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCXQ9H320 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VCXQ9H320 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.74■□□□□ 0.91
VCXQ9H320 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VCXQ9H320 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VCXQ9H320 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.74■□□□□ 0.91
VCXQ9H320 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
VCXQ9H320 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VCXQ9H320 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.74■□□□□ 0.91
VCXQ9H320 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.74■□□□□ 0.91
VCXQ9H320 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VCXQ9H320 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VCXQ9H320 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.73■□□□□ 0.91
VCXQ9H320 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VCXQ9H320 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VCXQ9H320 RP9P-202ENST00000450133 1212 ntBASIC20.73■□□□□ 0.91
VCXQ9H320 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
VCXQ9H320 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.73■□□□□ 0.91
VCXQ9H320 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
VCXQ9H320 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.73■□□□□ 0.91
VCXQ9H320 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VCXQ9H320 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.73■□□□□ 0.91
VCXQ9H320 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
VCXQ9H320 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.72■□□□□ 0.91
VCXQ9H320 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
VCXQ9H320 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
VCXQ9H320 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
VCXQ9H320 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
VCXQ9H320 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VCXQ9H320 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VCXQ9H320 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VCXQ9H320 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VCXQ9H320 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.72■□□□□ 0.91
VCXQ9H320 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
VCXQ9H320 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VCXQ9H320 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VCXQ9H320 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
VCXQ9H320 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VCXQ9H320 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VCXQ9H320 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VCXQ9H320 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.71■□□□□ 0.91
VCXQ9H320 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
VCXQ9H320 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.71■□□□□ 0.91
VCXQ9H320 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VCXQ9H320 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.71■□□□□ 0.91
VCXQ9H320 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
VCXQ9H320 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VCXQ9H320 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.7■□□□□ 0.9
VCXQ9H320 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VCXQ9H320 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
VCXQ9H320 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.7■□□□□ 0.9
VCXQ9H320 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VCXQ9H320 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.7■□□□□ 0.9
VCXQ9H320 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.7■□□□□ 0.9
VCXQ9H320 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VCXQ9H320 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
VCXQ9H320 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VCXQ9H320 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
VCXQ9H320 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
VCXQ9H320 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.69■□□□□ 0.9
VCXQ9H320 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
VCXQ9H320 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VCXQ9H320 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.69■□□□□ 0.9
VCXQ9H320 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
VCXQ9H320 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
VCXQ9H320 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
VCXQ9H320 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.69■□□□□ 0.9
VCXQ9H320 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.69■□□□□ 0.9
VCXQ9H320 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.69■□□□□ 0.9
VCXQ9H320 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
VCXQ9H320 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
VCXQ9H320 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VCXQ9H320 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VCXQ9H320 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
VCXQ9H320 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
VCXQ9H320 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
VCXQ9H320 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VCXQ9H320 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VCXQ9H320 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VCXQ9H320 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VCXQ9H320 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VCXQ9H320 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
VCXQ9H320 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.68■□□□□ 0.9
VCXQ9H320 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VCXQ9H320 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.68■□□□□ 0.9
VCXQ9H320 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.68■□□□□ 0.9
VCXQ9H320 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.68■□□□□ 0.9
VCXQ9H320 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.68■□□□□ 0.9
VCXQ9H320 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.68■□□□□ 0.9
VCXQ9H320 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VCXQ9H320 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.68■□□□□ 0.9
VCXQ9H320 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VCXQ9H320 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
VCXQ9H320 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
VCXQ9H320 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VCXQ9H320 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
VCXQ9H320 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VCXQ9H320 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.67■□□□□ 0.9
VCXQ9H320 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.67■□□□□ 0.9
VCXQ9H320 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VCXQ9H320 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms