Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.4■■□□□ 1.022e-7■■■■■ 29.7
XRN2Q9H0D6 BSG-210ENST00000576925 611 ntTSL 221.12■□□□□ 0.971e-6■■■■■ 29.7
XRN2Q9H0D6 BSG-207ENST00000573216 545 ntTSL 421.12■□□□□ 0.971e-6■■■■■ 29.7
XRN2Q9H0D6 BSG-211ENST00000576984 544 ntTSL 421.08■□□□□ 0.973e-9■■■■■ 29.7
XRN2Q9H0D6 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.942e-7■■■■■ 29.7
XRN2Q9H0D6 CEP170-225ENST00000523581 582 ntTSL 220.82■□□□□ 0.922e-7■■■■■ 29.7
XRN2Q9H0D6 PFKL-206ENST00000467315 1947 ntTSL 220.62■□□□□ 0.892e-6■■■■■ 29.7
XRN2Q9H0D6 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.97■□□□□ 0.792e-7■■■■■ 29.7
XRN2Q9H0D6 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.752e-7■■■■■ 29.7
XRN2Q9H0D6 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.53■□□□□ 0.721e-6■■■■■ 29.7
XRN2Q9H0D6 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.5■□□□□ 0.711e-6■■■■■ 29.7
XRN2Q9H0D6 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.712e-7■■■■■ 29.7
XRN2Q9H0D6 PACSIN2-210ENST00000453643 818 ntTSL 519.29■□□□□ 0.682e-7■■■■■ 29.7
XRN2Q9H0D6 ACBD4-205ENST00000585553 2241 ntTSL 219.05■□□□□ 0.642e-7■■■■■ 29.7
XRN2Q9H0D6 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.61e-6■■■■■ 29.7
XRN2Q9H0D6 CIZ1-220ENST00000485862 843 ntTSL 218.72■□□□□ 0.598e-14■■■■■ 29.7
XRN2Q9H0D6 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.552e-7■■■■■ 29.7
XRN2Q9H0D6 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.5■□□□□ 0.551e-6■■■■■ 29.7
XRN2Q9H0D6 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.5■□□□□ 0.551e-6■■■■■ 29.7
XRN2Q9H0D6 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.552e-7■■■■■ 29.7
XRN2Q9H0D6 NSUN2-208ENST00000513888 1290 ntTSL 218.49■□□□□ 0.552e-7■■■■■ 29.7
XRN2Q9H0D6 CEP170-223ENST00000522995 608 ntTSL 318.34■□□□□ 0.532e-7■■■■■ 29.7
XRN2Q9H0D6 BSG-213ENST00000613627 689 ntTSL 318.07■□□□□ 0.481e-6■■■■■ 29.7
XRN2Q9H0D6 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.01■□□□□ 0.472e-7■■■■■ 29.7
XRN2Q9H0D6 BSG-206ENST00000572899 582 ntTSL 217.86■□□□□ 0.451e-6■■■■■ 29.7
XRN2Q9H0D6 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.76■□□□□ 0.431e-6■■■■■ 29.7
XRN2Q9H0D6 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.282e-7■■■■■ 29.7
XRN2Q9H0D6 CEP170-221ENST00000522522 1180 ntTSL 1 (best)16.47■□□□□ 0.232e-7■■■■■ 29.7
XRN2Q9H0D6 PLEKHH3-207ENST00000591490 4339 ntTSL 216.46■□□□□ 0.232e-7■■■■■ 29.7
XRN2Q9H0D6 NSUN2-203ENST00000504374 3217 ntTSL 216.15■□□□□ 0.182e-7■■■■■ 29.7
XRN2Q9H0D6 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.152e-7■■■■■ 29.7
XRN2Q9H0D6 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.123e-10■■■■■ 29.7
XRN2Q9H0D6 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.117e-8■■■■■ 29.7
XRN2Q9H0D6 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.062e-7■■■■■ 29.7
XRN2Q9H0D6 PACSIN2-208ENST00000445706 511 ntTSL 515□□□□□ -0.012e-7■■■■■ 29.7
XRN2Q9H0D6 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.022e-7■■■■■ 29.7
XRN2Q9H0D6 PACSIN2-207ENST00000422336 664 ntTSL 514.48□□□□□ -0.092e-7■■■■■ 29.7
XRN2Q9H0D6 GSDMB-201ENST00000309481 1500 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.112e-7■■■■■ 29.7
XRN2Q9H0D6 NSUN2-202ENST00000502932 512 ntTSL 314.16□□□□□ -0.142e-7■■■■■ 29.7
XRN2Q9H0D6 GSDMB-205ENST00000418519 1597 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.342e-7■■■■■ 29.7
XRN2Q9H0D6 PGK1-203ENST00000476531 960 ntTSL 212.85□□□□□ -0.352e-7■■■■■ 29.7
XRN2Q9H0D6 GSDMB-212ENST00000520542 1546 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.372e-7■■■■■ 29.7
XRN2Q9H0D6 CEP170-204ENST00000366544 6805 ntTSL 5 BASIC12.12□□□□□ -0.472e-7■■■■■ 29.7
XRN2Q9H0D6 CEP170-203ENST00000366543 6727 ntTSL 5 BASIC11.93□□□□□ -0.52e-7■■■■■ 29.7
XRN2Q9H0D6 PTPN12-216ENST00000523952 500 ntTSL 411.72□□□□□ -0.532e-7■■■■■ 29.7
XRN2Q9H0D6 CREBBP-202ENST00000382070 7598 ntTSL 1 (best) BASIC11.67□□□□□ -0.548e-12■■■■■ 29.7
XRN2Q9H0D6 CIZ1-210ENST00000461765 677 ntTSL 310.68□□□□□ -0.78e-14■■■■■ 29.7
XRN2Q9H0D6 PPP2R2D-202ENST00000470416 6203 ntTSL 1 (best)10.45□□□□□ -0.741e-12■■■■■ 29.7
XRN2Q9H0D6 GSDMB-208ENST00000477054 4655 ntTSL 59.81□□□□□ -0.842e-7■■■■■ 29.7
XRN2Q9H0D6 ASNS-210ENST00000448127 579 ntTSL 29.53□□□□□ -0.882e-7■■■■■ 29.7
XRN2Q9H0D6 ASNS-213ENST00000454046 1947 ntTSL 59.42□□□□□ -0.92e-7■■■■■ 29.7
XRN2Q9H0D6 NSUN2-205ENST00000505892 3558 ntTSL 1 (best)7.94□□□□□ -1.142e-7■■■■■ 29.7
XRN2Q9H0D6 PTPN12-209ENST00000460731 582 ntTSL 26.33□□□□□ -1.42e-7■■■■■ 29.7
XRN2Q9H0D6 TRPC1-202ENST00000460401 397 ntTSL 36.17□□□□□ -1.422e-7■■■■■ 29.7
XRN2Q9H0D6 NSUN2-209ENST00000514127 614 ntTSL 33.88□□□□□ -1.792e-7■■■■■ 29.7
XRN2Q9H0D6 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.832e-7■■■■■ 29.7
XRN2Q9H0D6 IKBKG-203ENST00000440286 960 ntTSL 526.09■■□□□ 1.771e-9■■■■■ 29.7
XRN2Q9H0D6 MNT-204ENST00000572892 556 ntTSL 424.86■■□□□ 1.573e-18■■■■■ 29.7
XRN2Q9H0D6 AAMP-207ENST00000465442 1016 ntTSL 224.24■■□□□ 1.472e-8■■■■■ 29.7
XRN2Q9H0D6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.29■□□□□ 0.841e-9■■■■■ 29.7
XRN2Q9H0D6 IKBKG-209ENST00000612051 1972 ntTSL 1 (best)19.72■□□□□ 0.751e-9■■■■■ 29.7
XRN2Q9H0D6 SFXN5-203ENST00000411783 915 ntTSL 318.57■□□□□ 0.562e-6■■■■■ 29.7
XRN2Q9H0D6 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.314e-6■■■■■ 29.7
XRN2Q9H0D6 TIMM44-203ENST00000595831 1797 ntTSL 515.7■□□□□ 0.14e-6■■■■■ 29.7
XRN2Q9H0D6 CCDC57-207ENST00000419322 2829 ntAPPRIS ALT2 TSL 514.71□□□□□ -0.051e-6■■■■■ 29.7
XRN2Q9H0D6 IKBKG-202ENST00000422680 841 ntTSL 214.65□□□□□ -0.061e-9■■■■■ 29.7
XRN2Q9H0D6 IKBKG-204ENST00000445622 693 ntTSL 514.33□□□□□ -0.121e-9■■■■■ 29.7
XRN2Q9H0D6 DIP2C-205ENST00000634311 4961 ntTSL 5 BASIC13.38□□□□□ -0.275e-6■■■■■ 29.7
XRN2Q9H0D6 SFXN5-202ENST00000410065 840 ntTSL 1 (best) BASIC13.33□□□□□ -0.282e-6■■■■■ 29.7
XRN2Q9H0D6 SFXN5-207ENST00000461352 3578 ntTSL 1 (best)12.16□□□□□ -0.462e-6■■■■■ 29.7
XRN2Q9H0D6 SFXN5-211ENST00000474528 4072 ntTSL 1 (best)11.72□□□□□ -0.532e-6■■■■■ 29.7
XRN2Q9H0D6 CCDC57-205ENST00000392346 2964 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.581e-6■■■■■ 29.7
XRN2Q9H0D6 SFXN5-201ENST00000272433 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.582e-6■■■■■ 29.7
XRN2Q9H0D6 DIP2C-201ENST00000280886 7888 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.755e-6■■■■■ 29.7
XRN2Q9H0D6 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC22.66■■□□□ 1.226e-8■■■■■ 29.7
XRN2Q9H0D6 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.016e-8■■■■■ 29.7
XRN2Q9H0D6 SLC1A5-206ENST00000598022 276 ntTSL 315.83■□□□□ 0.122e-17■■■■■ 29.7
XRN2Q9H0D6 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.81■■□□□ 1.565e-7■■■■■ 29.7
XRN2Q9H0D6 PRKCZ-208ENST00000468310 690 ntTSL 525.95■■□□□ 1.744e-6■■■■■ 29.7
XRN2Q9H0D6 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.384e-6■■■■■ 29.7
XRN2Q9H0D6 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.162e-6■■■■■ 29.7
XRN2Q9H0D6 AC017083.4-201ENST00000406334 2306 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.32e-6■■■■■ 29.7
XRN2Q9H0D6 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.28□□□□□ -1.42e-6■■■■■ 29.7
XRN2Q9H0D6 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.64■□□□□ 0.252e-6■■■■■ 29.7
XRN2Q9H0D6 OSGIN1-206ENST00000565123 833 ntTSL 2 BASIC15.01□□□□□ -0.012e-7■■■■■ 29.7
XRN2Q9H0D6 SBNO2-209ENST00000590998 562 ntTSL 417.35■□□□□ 0.376e-6■■■■■ 29.6
XRN2Q9H0D6 ASNS-204ENST00000414884 584 ntTSL 223.06■■□□□ 1.288e-7■■■■■ 29.6
XRN2Q9H0D6 ASNS-208ENST00000442734 828 ntTSL 218.11■□□□□ 0.498e-7■■■■■ 29.6
XRN2Q9H0D6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.434e-9■■■■■ 29.6
XRN2Q9H0D6 NPDC1-204ENST00000485589 506 ntTSL 221.37■■□□□ 1.014e-9■■■■■ 29.6
XRN2Q9H0D6 NPDC1-205ENST00000488145 701 ntTSL 221.2■□□□□ 0.984e-9■■■■■ 29.6
XRN2Q9H0D6 NFKBIA-207ENST00000557100 825 ntTSL 320.59■□□□□ 0.892e-7■■■■■ 29.6
XRN2Q9H0D6 NFKBIA-210ENST00000557459 780 ntTSL 218.52■□□□□ 0.562e-7■■■■■ 29.6
XRN2Q9H0D6 AGFG2-203ENST00000430857 915 ntTSL 531.15■■■□□ 2.581e-27■■■■■ 29.6
XRN2Q9H0D6 AGFG2-205ENST00000477022 1327 ntTSL 1 (best)23.97■■□□□ 1.431e-27■■■■■ 29.6
XRN2Q9H0D6 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.56■□□□□ 0.43e-6■■■■■ 29.6
XRN2Q9H0D6 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC16.94■□□□□ 0.36e-6■■■■■ 29.6
XRN2Q9H0D6 NFIC-211ENST00000641145 8399 ntBASIC15.97■□□□□ 0.152e-6■■■■■ 29.6
XRN2Q9H0D6 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.032e-6■■■■■ 29.6
XRN2Q9H0D6 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.68□□□□□ -0.222e-6■■■■■ 29.6
Retrieved 100 of 21,068 protein–RNA pairs in 229.5 ms