RNA–Protein interactions for RNA: ENST00000474528.5

SFXN5-211, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 4,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-211ENST00000474528 NISCHQ9Y2I1 1504 aa22.74■■□□□ 1.23
SFXN5-211ENST00000474528 DCAF8L2P0C7V8 631 aa21.11■□□□□ 0.97
SFXN5-211ENST00000474528 SHROOM4Q9ULL8 1493 aa20.7■□□□□ 0.9
SFXN5-211ENST00000474528 SUPT5HO00267 1087 aaKnown RBP20.47■□□□□ 0.87
SFXN5-211ENST00000474528 EHMT2Q96KQ7 1210 aa19.42■□□□□ 0.7
SFXN5-211ENST00000474528 FAM9AQ8IZU1 332 aaPredicted RBP19.15■□□□□ 0.66
SFXN5-211ENST00000474528 ABCC9O60706 1549 aa19.01■□□□□ 0.63
SFXN5-211ENST00000474528 ZCCHC6Q5VYS8 1495 aaKnown RBP19.01■□□□□ 0.63
SFXN5-211ENST00000474528 CHIC1Q5VXU3 224 aa18.97■□□□□ 0.63
SFXN5-211ENST00000474528 PCGF6Q9BYE7 350 aa18.89■□□□□ 0.61
SFXN5-211ENST00000474528 CCDC180Q9P1Z9 1646 aa18.86■□□□□ 0.61
SFXN5-211ENST00000474528 TRIM41Q8WV44 630 aa18.85■□□□□ 0.61
SFXN5-211ENST00000474528 LOC105371045A0A1W2PR82 267 aa18.82■□□□□ 0.6
SFXN5-211ENST00000474528 TTBK1Q5TCY1 1321 aaPredicted RBP18.67■□□□□ 0.58
SFXN5-211ENST00000474528 PABPN1Q86U42 306 aaKnown RBP eCLIP18.59■□□□□ 0.57
SFXN5-211ENST00000474528 SCRIBQ14160 1630 aa18.55■□□□□ 0.56
SFXN5-211ENST00000474528 PPARGC1BQ86YN6 1023 aaKnown RBP18.54■□□□□ 0.56
SFXN5-211ENST00000474528 RANGAP1P46060 587 aaPredicted RBP18.47■□□□□ 0.55
SFXN5-211ENST00000474528 UBTFP17480 764 aaKnown RBP18.29■□□□□ 0.52
SFXN5-211ENST00000474528 MYO15BQ96JP2 1530 aa18.29■□□□□ 0.52
SFXN5-211ENST00000474528 HRCP23327 699 aa18.15■□□□□ 0.5
SFXN5-211ENST00000474528 TRIM26Q12899 539 aaPredicted RBP18.15■□□□□ 0.5
SFXN5-211ENST00000474528 RSF1Q96T23 1441 aaPredicted RBP18.14■□□□□ 0.5
SFXN5-211ENST00000474528 DCAF1Q9Y4B6 1507 aa18.12■□□□□ 0.49
SFXN5-211ENST00000474528 APLP2Q06481 763 aa18.11■□□□□ 0.49
SFXN5-211ENST00000474528 CECR2Q9BXF3 1484 aa18.03■□□□□ 0.48
SFXN5-211ENST00000474528 CCER1Q8TC90 406 aaPredicted RBP18.01■□□□□ 0.47
SFXN5-211ENST00000474528 NACADO15069 1562 aa17.93■□□□□ 0.46
SFXN5-211ENST00000474528 RB1CC1Q8TDY2 1594 aa17.88■□□□□ 0.45
SFXN5-211ENST00000474528 ATP1B4Q9UN42 357 aaPredicted RBP17.88■□□□□ 0.45
SFXN5-211ENST00000474528 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.82■□□□□ 0.44
SFXN5-211ENST00000474528 MROH2BQ7Z745 1585 aa17.79■□□□□ 0.44
SFXN5-211ENST00000474528 ZEB1P37275 1124 aaPredicted RBP17.79■□□□□ 0.44
SFXN5-211ENST00000474528 HNRNPUL2Q1KMD3 747 aaKnown RBP17.76■□□□□ 0.43
SFXN5-211ENST00000474528 CSRNP3Q8WYN3 585 aa17.71■□□□□ 0.43
SFXN5-211ENST00000474528 ITGAEP38570 1179 aa17.66■□□□□ 0.42
SFXN5-211ENST00000474528 WIZO95785 1651 aa17.61■□□□□ 0.41
SFXN5-211ENST00000474528 BAZ1AQ9NRL2 1556 aaPredicted RBP17.58■□□□□ 0.4
SFXN5-211ENST00000474528 ABCC8Q09428 1581 aa17.46■□□□□ 0.39
SFXN5-211ENST00000474528 CCDC88BA6NC98 1476 aa17.46■□□□□ 0.38
SFXN5-211ENST00000474528 YTHDC1Q96MU7 727 aaKnown RBP17.42■□□□□ 0.38
SFXN5-211ENST00000474528 P3H3Q8IVL6 736 aa17.42■□□□□ 0.38
SFXN5-211ENST00000474528 SOGA1O94964 1423 aa17.41■□□□□ 0.38
SFXN5-211ENST00000474528 BAZ1BQ9UIG0 1483 aaKnown RBP17.39■□□□□ 0.37
SFXN5-211ENST00000474528 WRNQ14191 1432 aaPredicted RBP eCLIP17.37■□□□□ 0.371e-6■■■■■ 58.5
SFXN5-211ENST00000474528 CEP162Q5TB80 1403 aa17.3■□□□□ 0.36
SFXN5-211ENST00000474528 SMARCA4P51532 1647 aa17.26■□□□□ 0.35
SFXN5-211ENST00000474528 FAM50AQ14320 339 aaKnown RBP17.25■□□□□ 0.35
SFXN5-211ENST00000474528 TOP2AP11388 1531 aaKnown RBP17.24■□□□□ 0.35
SFXN5-211ENST00000474528 DIEXFQ68CQ4 756 aaKnown RBP17.22■□□□□ 0.35
SFXN5-211ENST00000474528 ARID3CA6NKF2 412 aa17.2■□□□□ 0.34
SFXN5-211ENST00000474528 CLIP1P30622 1438 aa17.19■□□□□ 0.34
SFXN5-211ENST00000474528 RUSC2Q8N2Y8 1516 aa17.19■□□□□ 0.34
SFXN5-211ENST00000474528 CENPBP07199 599 aaPredicted RBP17.19■□□□□ 0.34
SFXN5-211ENST00000474528 GOLGA3Q08378 1498 aa17.15■□□□□ 0.34
SFXN5-211ENST00000474528 TNIKQ9UKE5 1360 aa17.15■□□□□ 0.34
SFXN5-211ENST00000474528 ATAD2BQ9ULI0 1458 aa17.13■□□□□ 0.33
SFXN5-211ENST00000474528 EEA1Q15075 1411 aa17.11■□□□□ 0.33
SFXN5-211ENST00000474528 SMARCA2P51531 1590 aa17.09■□□□□ 0.33
SFXN5-211ENST00000474528 NEUROD1Q13562 356 aa17.08■□□□□ 0.33
SFXN5-211ENST00000474528 FBLN2P98095 1184 aa17.07■□□□□ 0.32
SFXN5-211ENST00000474528 CEP164Q9UPV0 1460 aa17.03■□□□□ 0.32
SFXN5-211ENST00000474528 ZNF316A6NFI3 1004 aaPredicted RBP16.98■□□□□ 0.31
SFXN5-211ENST00000474528 KIF27Q86VH2 1401 aa16.96■□□□□ 0.31
SFXN5-211ENST00000474528 CNGB1Q14028 1251 aaPredicted RBP16.91■□□□□ 0.3
SFXN5-211ENST00000474528 RAPGEF2Q9Y4G8 1499 aa16.9■□□□□ 0.3
SFXN5-211ENST00000474528 BICRAQ9NZM4 1560 aa16.9■□□□□ 0.3
SFXN5-211ENST00000474528 CUX2O14529 1486 aa16.9■□□□□ 0.3
SFXN5-211ENST00000474528 TRIM52Q96A61 297 aa16.89■□□□□ 0.29
SFXN5-211ENST00000474528 KANK4Q5T7N3 995 aaPredicted RBP16.89■□□□□ 0.29
SFXN5-211ENST00000474528 POLR3GLQ9BT43 218 aa16.83■□□□□ 0.29
SFXN5-211ENST00000474528 UNC13AQ9UPW8 1703 aa16.82■□□□□ 0.28
SFXN5-211ENST00000474528 CARMIL1Q5VZK9 1371 aa16.8■□□□□ 0.28
SFXN5-211ENST00000474528 VPS8Q8N3P4 1428 aa16.8■□□□□ 0.28
SFXN5-211ENST00000474528 CHIC2Q9UKJ5 165 aa16.8■□□□□ 0.28
SFXN5-211ENST00000474528 GTF3C3Q9Y5Q9 886 aa16.79■□□□□ 0.28
SFXN5-211ENST00000474528 CADPSQ9ULU8 1353 aa16.77■□□□□ 0.28
SFXN5-211ENST00000474528 SYNJ1O43426 1573 aa16.77■□□□□ 0.27
SFXN5-211ENST00000474528 EIF4G1Q04637 1599 aaKnown RBP16.76■□□□□ 0.27
SFXN5-211ENST00000474528 ZNF777Q9ULD5 760 aaPredicted RBP16.74■□□□□ 0.27
SFXN5-211ENST00000474528 TDRD9Q8NDG6 1382 aaKnown RBP16.74■□□□□ 0.27
SFXN5-211ENST00000474528 HIRIP3Q9BW71 556 aaPredicted RBP16.74■□□□□ 0.27
SFXN5-211ENST00000474528 MIER1Q8N108 512 aa16.71■□□□□ 0.27
SFXN5-211ENST00000474528 MTUS2Q5JR59 1369 aa16.7■□□□□ 0.26
SFXN5-211ENST00000474528 ACIN1Q9UKV3 1341 aaKnown RBP16.7■□□□□ 0.26
SFXN5-211ENST00000474528 NCAPD3P42695 1498 aa16.69■□□□□ 0.26
SFXN5-211ENST00000474528 MYT1LQ9UL68 1186 aa16.69■□□□□ 0.26
SFXN5-211ENST00000474528 ZNF326Q5BKZ1 582 aaKnown RBP16.67■□□□□ 0.26
SFXN5-211ENST00000474528 PELP1Q8IZL8 1130 aaKnown RBP16.65■□□□□ 0.26
SFXN5-211ENST00000474528 RRP7BPQ9NSQ0 103 aa16.64■□□□□ 0.25
SFXN5-211ENST00000474528 DNAJC5BQ9UF47 199 aa16.64■□□□□ 0.25
SFXN5-211ENST00000474528 SCAF1Q9H7N4 1312 aaKnown RBP16.63■□□□□ 0.25
SFXN5-211ENST00000474528 CHMP7Q8WUX9 453 aaPredicted RBP16.62■□□□□ 0.25
SFXN5-211ENST00000474528 SIN3AQ96ST3 1273 aa16.62■□□□□ 0.25
SFXN5-211ENST00000474528 DDX10Q13206 875 aaKnown RBP16.61■□□□□ 0.25
SFXN5-211ENST00000474528 CCNB3Q8WWL7 1395 aa16.6■□□□□ 0.25
SFXN5-211ENST00000474528 FANCD2Q9BXW9 1451 aa16.59■□□□□ 0.25
SFXN5-211ENST00000474528 RAD54L2Q9Y4B4 1467 aa16.58■□□□□ 0.24
SFXN5-211ENST00000474528 IGF1RP08069 1367 aa16.57■□□□□ 0.24
SFXN5-211ENST00000474528 FGD5Q6ZNL6 1462 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms