Protein–RNA interactions for Protein: Q8TCA0

LRRC20, Leucine-rich repeat-containing protein 20, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC20Q8TCA0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC20Q8TCA0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC20Q8TCA0 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC20Q8TCA0 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.22■□□□□ 0.51
LRRC20Q8TCA0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC20Q8TCA0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC20Q8TCA0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.22■□□□□ 0.51
LRRC20Q8TCA0 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC20Q8TCA0 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC20Q8TCA0 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC20Q8TCA0 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC20Q8TCA0 AC016575.1-201ENST00000607026 382 ntBASIC18.22■□□□□ 0.51
LRRC20Q8TCA0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LRRC20Q8TCA0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.22■□□□□ 0.51
LRRC20Q8TCA0 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC20Q8TCA0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC20Q8TCA0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC20Q8TCA0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC20Q8TCA0 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC20Q8TCA0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.22■□□□□ 0.51
LRRC20Q8TCA0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC20Q8TCA0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.22■□□□□ 0.51
LRRC20Q8TCA0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC20Q8TCA0 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC20Q8TCA0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.21■□□□□ 0.51
LRRC20Q8TCA0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.21■□□□□ 0.51
LRRC20Q8TCA0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC20Q8TCA0 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC20Q8TCA0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC18.21■□□□□ 0.51
LRRC20Q8TCA0 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC18.21■□□□□ 0.51
LRRC20Q8TCA0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC20Q8TCA0 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
LRRC20Q8TCA0 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC20Q8TCA0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
LRRC20Q8TCA0 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.21■□□□□ 0.5
LRRC20Q8TCA0 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC18.2■□□□□ 0.5
LRRC20Q8TCA0 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC20Q8TCA0 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
LRRC20Q8TCA0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
LRRC20Q8TCA0 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC20Q8TCA0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.2■□□□□ 0.5
LRRC20Q8TCA0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.2■□□□□ 0.5
LRRC20Q8TCA0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
LRRC20Q8TCA0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC20Q8TCA0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC20Q8TCA0 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC20Q8TCA0 AC139530.1-201ENST00000575312 1977 ntBASIC18.2■□□□□ 0.5
LRRC20Q8TCA0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC20Q8TCA0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.2■□□□□ 0.5
LRRC20Q8TCA0 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC20Q8TCA0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC20Q8TCA0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC20Q8TCA0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC20Q8TCA0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC20Q8TCA0 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC20Q8TCA0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC20Q8TCA0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.19■□□□□ 0.5
LRRC20Q8TCA0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC20Q8TCA0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.19■□□□□ 0.5
LRRC20Q8TCA0 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
LRRC20Q8TCA0 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
LRRC20Q8TCA0 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC20Q8TCA0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
LRRC20Q8TCA0 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
LRRC20Q8TCA0 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC20Q8TCA0 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC20Q8TCA0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC20Q8TCA0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC20Q8TCA0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.18■□□□□ 0.5
LRRC20Q8TCA0 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC20Q8TCA0 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC20Q8TCA0 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC20Q8TCA0 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC20Q8TCA0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC20Q8TCA0 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC20Q8TCA0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC20Q8TCA0 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC20Q8TCA0 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC20Q8TCA0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LRRC20Q8TCA0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.18■□□□□ 0.5
LRRC20Q8TCA0 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC20Q8TCA0 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.17■□□□□ 0.5
LRRC20Q8TCA0 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC20Q8TCA0 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC20Q8TCA0 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.17■□□□□ 0.5
LRRC20Q8TCA0 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC20Q8TCA0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.17■□□□□ 0.5
LRRC20Q8TCA0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC20Q8TCA0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.17■□□□□ 0.5
LRRC20Q8TCA0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC20Q8TCA0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC20Q8TCA0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
LRRC20Q8TCA0 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.17■□□□□ 0.5
LRRC20Q8TCA0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC20Q8TCA0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC20Q8TCA0 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC20Q8TCA0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.17■□□□□ 0.5
LRRC20Q8TCA0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC20Q8TCA0 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC20Q8TCA0 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms