Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.124e-8■■■■□ 21.9
LARP4Q71RC2 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.47■□□□□ 0.074e-8■■■■□ 21.9
LARP4Q71RC2 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.01□□□□□ -0.174e-8■■■■□ 21.9
LARP4Q71RC2 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC13.86□□□□□ -0.194e-8■■■■□ 21.9
LARP4Q71RC2 BCL2L12-207ENST00000598979 893 ntTSL 313.48□□□□□ -0.254e-8■■■■□ 21.9
LARP4Q71RC2 BCL2L12-213ENST00000619007 1630 ntTSL 1 (best) BASIC12.03□□□□□ -0.484e-8■■■■□ 21.9
LARP4Q71RC2 RPL27-203ENST00000587478 584 ntTSL 220.17■□□□□ 0.822e-15■■■■□ 21.9
LARP4Q71RC2 MRPL52-209ENST00000553965 327 ntTSL 23.81□□□□□ -1.87e-10■■■■□ 21.9
LARP4Q71RC2 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.449e-6■■■■□ 21.9
LARP4Q71RC2 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.51■■□□□ 1.199e-6■■■■□ 21.9
LARP4Q71RC2 PSMC5-203ENST00000578570 1680 ntTSL 220.5■□□□□ 0.879e-6■■■■□ 21.9
LARP4Q71RC2 HSF1-214ENST00000614796 1724 ntTSL 518.97■□□□□ 0.639e-6■■■■□ 21.9
LARP4Q71RC2 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.65■□□□□ 0.589e-6■■■■□ 21.9
LARP4Q71RC2 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.61■□□□□ 0.579e-6■■■■□ 21.9
LARP4Q71RC2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.47■□□□□ 0.559e-6■■■■□ 21.9
LARP4Q71RC2 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.539e-6■■■■□ 21.9
LARP4Q71RC2 SARDH-206ENST00000427237 1957 ntTSL 217.86■□□□□ 0.459e-6■■■■□ 21.9
LARP4Q71RC2 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.419e-6■■■■□ 21.9
LARP4Q71RC2 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.54■□□□□ 0.49e-6■■■■□ 21.9
LARP4Q71RC2 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.399e-6■■■■□ 21.9
LARP4Q71RC2 HSF1-202ENST00000527328 2336 ntTSL 217.43■□□□□ 0.389e-6■■■■□ 21.9
LARP4Q71RC2 BLVRB-203ENST00000597870 1392 ntTSL 517.21■□□□□ 0.354e-14■■■■□ 21.9
LARP4Q71RC2 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.61■□□□□ 0.259e-6■■■■□ 21.9
LARP4Q71RC2 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.19■□□□□ 0.189e-6■■■■□ 21.9
LARP4Q71RC2 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.13■□□□□ 0.179e-6■■■■□ 21.9
LARP4Q71RC2 BANP-214ENST00000466847 772 ntTSL 215.85■□□□□ 0.139e-6■■■■□ 21.9
LARP4Q71RC2 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.22■□□□□ 0.039e-6■■■■□ 21.9
LARP4Q71RC2 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.82□□□□□ -0.049e-6■■■■□ 21.9
LARP4Q71RC2 PSMC5-217ENST00000584536 804 ntTSL 514.05□□□□□ -0.169e-6■■■■□ 21.9
LARP4Q71RC2 PSMC5-219ENST00000584880 597 ntTSL 313.95□□□□□ -0.189e-6■■■■□ 21.9
LARP4Q71RC2 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.91□□□□□ -0.189e-6■■■■□ 21.9
LARP4Q71RC2 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.224e-14■■■■□ 21.9
LARP4Q71RC2 APEX1-204ENST00000553368 304 ntTSL 313.58□□□□□ -0.249e-6■■■■□ 21.9
LARP4Q71RC2 HSF1-210ENST00000532338 3451 ntTSL 213.14□□□□□ -0.319e-6■■■■□ 21.9
LARP4Q71RC2 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.359e-6■■■■□ 21.9
LARP4Q71RC2 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC12.59□□□□□ -0.394e-14■■■■□ 21.9
LARP4Q71RC2 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.419e-6■■■■□ 21.9
LARP4Q71RC2 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC12.35□□□□□ -0.439e-6■■■■□ 21.9
LARP4Q71RC2 APEX1-208ENST00000554813 654 ntTSL 312.13□□□□□ -0.479e-6■■■■□ 21.9
LARP4Q71RC2 APEX1-211ENST00000555839 952 ntTSL 212.13□□□□□ -0.479e-6■■■■□ 21.9
LARP4Q71RC2 SARDH-207ENST00000439388 3216 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.489e-6■■■■□ 21.9
LARP4Q71RC2 APEX1-215ENST00000557150 740 ntTSL 311.93□□□□□ -0.59e-6■■■■□ 21.9
LARP4Q71RC2 APEX1-213ENST00000556296 571 ntTSL 411.9□□□□□ -0.59e-6■■■■□ 21.9
LARP4Q71RC2 APEX1-217ENST00000557181 566 ntTSL 311.86□□□□□ -0.519e-6■■■■□ 21.9
LARP4Q71RC2 APEX1-207ENST00000554325 568 ntTSL 511.86□□□□□ -0.519e-6■■■■□ 21.9
LARP4Q71RC2 PSMC5-205ENST00000579147 2586 ntTSL 211.53□□□□□ -0.569e-6■■■■□ 21.9
LARP4Q71RC2 APEX1-212ENST00000556054 773 ntTSL 311.48□□□□□ -0.579e-6■■■■□ 21.9
LARP4Q71RC2 APEX1-209ENST00000555306 898 ntTSL 511.48□□□□□ -0.579e-6■■■■□ 21.9
LARP4Q71RC2 APEX1-219ENST00000557365 831 ntTSL 311.48□□□□□ -0.579e-6■■■■□ 21.9
LARP4Q71RC2 BLVRB-204ENST00000601346 676 ntTSL 211.33□□□□□ -0.64e-14■■■■□ 21.9
LARP4Q71RC2 BANP-224ENST00000565242 801 ntTSL 311.23□□□□□ -0.619e-6■■■■□ 21.9
LARP4Q71RC2 PSMC5-207ENST00000580063 562 ntTSL 210.91□□□□□ -0.669e-6■■■■□ 21.9
LARP4Q71RC2 CCDC85C-207ENST00000557769 3793 ntTSL 2 BASIC10.73□□□□□ -0.699e-6■■■■□ 21.9
LARP4Q71RC2 APEX1-220ENST00000557592 640 ntTSL 510.63□□□□□ -0.719e-6■■■■□ 21.9
LARP4Q71RC2 NSMCE1-209ENST00000565384 580 ntTSL 310.46□□□□□ -0.737e-11■■■■□ 21.9
LARP4Q71RC2 APEX1-206ENST00000553681 899 ntTSL 310.15□□□□□ -0.789e-6■■■■□ 21.9
LARP4Q71RC2 CCDC85C-201ENST00000380243 16393 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.829e-6■■■■□ 21.9
LARP4Q71RC2 ANKMY1-217ENST00000459901 3936 ntTSL 49.88□□□□□ -0.839e-6■■■■□ 21.9
LARP4Q71RC2 PSMC5-221ENST00000585242 1178 ntTSL 59.66□□□□□ -0.869e-6■■■■□ 21.9
LARP4Q71RC2 PSMC5-204ENST00000579031 772 ntTSL 29.45□□□□□ -0.99e-6■■■■□ 21.9
LARP4Q71RC2 VPS25-205ENST00000590339 668 ntTSL 29.21□□□□□ -0.949e-6■■■■□ 21.9
LARP4Q71RC2 APEX1-218ENST00000557344 671 ntTSL 29.11□□□□□ -0.959e-6■■■■□ 21.9
LARP4Q71RC2 NSMCE1-203ENST00000562039 260 ntTSL 38.65□□□□□ -1.027e-11■■■■□ 21.9
LARP4Q71RC2 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.39e-6■■■■□ 21.9
LARP4Q71RC2 EIF1AY-203ENST00000464196 3148 ntTSL 26.62□□□□□ -1.359e-6■■■■□ 21.9
LARP4Q71RC2 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC6.48□□□□□ -1.379e-6■■■■□ 21.9
LARP4Q71RC2 PSMC5-218ENST00000584657 576 ntTSL 25.6□□□□□ -1.519e-6■■■■□ 21.9
LARP4Q71RC2 EIF1AY-205ENST00000485584 641 ntTSL 25.52□□□□□ -1.539e-6■■■■□ 21.9
LARP4Q71RC2 VPS25-204ENST00000589577 603 ntTSL 55.35□□□□□ -1.559e-6■■■■□ 21.9
LARP4Q71RC2 PSMB3-207ENST00000610434 510 ntTSL 39.9□□□□□ -0.821e-7■■■■□ 21.9
LARP4Q71RC2 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.332e-7■■■■□ 21.8
LARP4Q71RC2 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.63e-6■■■■□ 21.8
LARP4Q71RC2 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.17■□□□□ 0.53e-6■■■■□ 21.8
LARP4Q71RC2 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.13□□□□□ -0.153e-6■■■■□ 21.8
LARP4Q71RC2 ATP5J2-207ENST00000481899 738 ntTSL 25.64□□□□□ -1.512e-9■■■■□ 21.8
LARP4Q71RC2 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.39■□□□□ 0.374e-7■■■■□ 21.8
LARP4Q71RC2 TMCO1-202ENST00000392129 1946 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.494e-7■■■■□ 21.8
LARP4Q71RC2 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC11.6□□□□□ -0.554e-7■■■■□ 21.8
LARP4Q71RC2 TMCO1-201ENST00000367881 2224 ntTSL 1 (best) BASIC10.68□□□□□ -0.74e-7■■■■□ 21.8
LARP4Q71RC2 TMCO1-208ENST00000612311 4468 ntTSL 1 (best) BASIC8.3□□□□□ -1.084e-7■■■■□ 21.8
LARP4Q71RC2 IL32-214ENST00000528652 519 ntTSL 317.52■□□□□ 0.41e-13■■■■□ 21.8
LARP4Q71RC2 KIAA1328-210ENST00000592611 1798 ntTSL 215.3■□□□□ 0.043e-6■■■■□ 21.8
LARP4Q71RC2 KIAA1328-204ENST00000587139 3256 ntTSL 511.82□□□□□ -0.523e-6■■■■□ 21.8
LARP4Q71RC2 KIAA1328-207ENST00000591619 5881 ntTSL 1 (best) BASIC8.23□□□□□ -1.093e-6■■■■□ 21.8
LARP4Q71RC2 KIAA1328-206ENST00000590617 1835 ntTSL 1 (best)5.97□□□□□ -1.453e-6■■■■□ 21.8
LARP4Q71RC2 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.96□□□□□ -1.453e-6■■■■□ 21.8
LARP4Q71RC2 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.53e-6■■■■□ 21.8
LARP4Q71RC2 KIAA1328-208ENST00000591911 496 ntTSL 54.23□□□□□ -1.733e-6■■■■□ 21.8
LARP4Q71RC2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.12■■□□□ 1.454e-7■■■■□ 21.7
LARP4Q71RC2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.65■■□□□ 1.384e-7■■■■□ 21.7
LARP4Q71RC2 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.164e-7■■■■□ 21.7
LARP4Q71RC2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.19■■□□□ 1.144e-7■■■■□ 21.7
LARP4Q71RC2 CDC16-201ENST00000252457 2034 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.844e-7■■■■□ 21.7
LARP4Q71RC2 CDC16-205ENST00000375308 2034 ntTSL 1 (best) BASIC9.8□□□□□ -0.844e-7■■■■□ 21.7
LARP4Q71RC2 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC6.66□□□□□ -1.344e-7■■■■□ 21.7
LARP4Q71RC2 CDC16-207ENST00000461716 700 ntTSL 55.65□□□□□ -1.54e-7■■■■□ 21.7
LARP4Q71RC2 HDGF-209ENST00000495212 744 ntTSL 318.16■□□□□ 0.55e-9■■■■□ 21.7
LARP4Q71RC2 PSMA5-204ENST00000490870 1667 ntTSL 1 (best)9.89□□□□□ -0.831e-8■■■■□ 21.7
LARP4Q71RC2 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.831e-8■■■■□ 21.7
LARP4Q71RC2 MZT2A-206ENST00000491265 2826 ntTSL 221.99■■□□□ 1.114e-10■■■■□ 21.7
Retrieved 100 of 15,922 protein–RNA pairs in 130.1 ms