Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CKS1BP61024 MIR4449-201ENST00000578365 66 ntBASIC15.1■□□□□ 0.01
CKS1BP61024 AC087393.1-201ENST00000582896 145 ntBASIC15.1■□□□□ 0.01
CKS1BP61024 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CKS1BP61024 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC15.1■□□□□ 0.01
CKS1BP61024 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CKS1BP61024 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CKS1BP61024 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CKS1BP61024 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CKS1BP61024 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CKS1BP61024 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CKS1BP61024 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CKS1BP61024 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CKS1BP61024 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CKS1BP61024 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CKS1BP61024 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CKS1BP61024 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CKS1BP61024 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CKS1BP61024 IDNK-203ENST00000405990 629 ntTSL 2 BASIC15.09■□□□□ 0.01
CKS1BP61024 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CKS1BP61024 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CKS1BP61024 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CKS1BP61024 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CKS1BP61024 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC15.09■□□□□ 0.01
CKS1BP61024 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CKS1BP61024 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CKS1BP61024 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC15.09■□□□□ 0.01
CKS1BP61024 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CKS1BP61024 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CKS1BP61024 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CKS1BP61024 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
CKS1BP61024 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
CKS1BP61024 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
CKS1BP61024 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CKS1BP61024 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CKS1BP61024 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CKS1BP61024 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CKS1BP61024 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC15.08■□□□□ 0
CKS1BP61024 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CKS1BP61024 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CKS1BP61024 RNF126P1-201ENST00000567452 1320 ntBASIC15.08■□□□□ 0
CKS1BP61024 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.08■□□□□ 0
CKS1BP61024 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CKS1BP61024 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CKS1BP61024 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
CKS1BP61024 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CKS1BP61024 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CKS1BP61024 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CKS1BP61024 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC15.07■□□□□ 0
CKS1BP61024 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CKS1BP61024 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CKS1BP61024 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CKS1BP61024 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC15.07■□□□□ 0
CKS1BP61024 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CKS1BP61024 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CKS1BP61024 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CKS1BP61024 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CKS1BP61024 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CKS1BP61024 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC15.07■□□□□ 0
CKS1BP61024 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC15.07■□□□□ 0
CKS1BP61024 AL592293.1-201ENST00000502889 1188 ntBASIC15.07■□□□□ 0
CKS1BP61024 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
CKS1BP61024 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CKS1BP61024 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
CKS1BP61024 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
CKS1BP61024 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CKS1BP61024 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC15.07■□□□□ 0
CKS1BP61024 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CKS1BP61024 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CKS1BP61024 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
CKS1BP61024 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC15.07■□□□□ 0
CKS1BP61024 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC15.07■□□□□ 0
CKS1BP61024 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CKS1BP61024 AL020996.1-203ENST00000536896 2307 ntBASIC15.06■□□□□ 0
CKS1BP61024 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC15.06■□□□□ 0
CKS1BP61024 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CKS1BP61024 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.06■□□□□ 0
CKS1BP61024 LINC00526-201ENST00000581067 1875 ntBASIC15.06■□□□□ 0
CKS1BP61024 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CKS1BP61024 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
CKS1BP61024 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
CKS1BP61024 HYI-210ENST00000486909 905 ntTSL 5 BASIC15.06■□□□□ 0
CKS1BP61024 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC15.06■□□□□ 0
CKS1BP61024 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CKS1BP61024 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CKS1BP61024 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CKS1BP61024 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CKS1BP61024 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CKS1BP61024 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC15.06■□□□□ 0
CKS1BP61024 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CKS1BP61024 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CKS1BP61024 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CKS1BP61024 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CKS1BP61024 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CKS1BP61024 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CKS1BP61024 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CKS1BP61024 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
CKS1BP61024 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CKS1BP61024 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CKS1BP61024 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms