Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHC1P29353 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.9■□□□□ 0.78
SHC1P29353 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHC1P29353 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SHC1P29353 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
SHC1P29353 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHC1P29353 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SHC1P29353 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.89■□□□□ 0.77
SHC1P29353 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SHC1P29353 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.89■□□□□ 0.77
SHC1P29353 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.89■□□□□ 0.77
SHC1P29353 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.89■□□□□ 0.77
SHC1P29353 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHC1P29353 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.88■□□□□ 0.77
SHC1P29353 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SHC1P29353 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHC1P29353 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SHC1P29353 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHC1P29353 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.88■□□□□ 0.77
SHC1P29353 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.88■□□□□ 0.77
SHC1P29353 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHC1P29353 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.88■□□□□ 0.77
SHC1P29353 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.88■□□□□ 0.77
SHC1P29353 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SHC1P29353 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.88■□□□□ 0.77
SHC1P29353 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.88■□□□□ 0.77
SHC1P29353 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.88■□□□□ 0.77
SHC1P29353 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.87■□□□□ 0.77
SHC1P29353 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.87■□□□□ 0.77
SHC1P29353 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHC1P29353 SLC47A1P1-202ENST00000449666 945 ntBASIC19.87■□□□□ 0.77
SHC1P29353 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
SHC1P29353 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
SHC1P29353 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.87■□□□□ 0.77
SHC1P29353 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.87■□□□□ 0.77
SHC1P29353 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.87■□□□□ 0.77
SHC1P29353 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHC1P29353 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SHC1P29353 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SHC1P29353 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.86■□□□□ 0.77
SHC1P29353 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.86■□□□□ 0.77
SHC1P29353 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SHC1P29353 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SHC1P29353 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.86■□□□□ 0.77
SHC1P29353 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHC1P29353 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SHC1P29353 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHC1P29353 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SHC1P29353 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SHC1P29353 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.85■□□□□ 0.77
SHC1P29353 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHC1P29353 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHC1P29353 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SHC1P29353 AP001330.3-201ENST00000520123 633 ntBASIC19.85■□□□□ 0.77
SHC1P29353 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
SHC1P29353 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SHC1P29353 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHC1P29353 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SHC1P29353 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHC1P29353 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHC1P29353 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHC1P29353 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.84■□□□□ 0.77
SHC1P29353 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
SHC1P29353 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SHC1P29353 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHC1P29353 OR2I1P-207ENST00000453522 948 ntBASIC19.84■□□□□ 0.77
SHC1P29353 AF213884.3-201ENST00000563833 479 ntBASIC19.84■□□□□ 0.77
SHC1P29353 AC005837.3-201ENST00000612163 286 ntBASIC19.84■□□□□ 0.77
SHC1P29353 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHC1P29353 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHC1P29353 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.84■□□□□ 0.77
SHC1P29353 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SHC1P29353 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.84■□□□□ 0.77
SHC1P29353 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHC1P29353 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SHC1P29353 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
SHC1P29353 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
SHC1P29353 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SHC1P29353 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.83■□□□□ 0.77
SHC1P29353 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.83■□□□□ 0.77
SHC1P29353 EDA-201ENST00000338901 1233 ntBASIC19.83■□□□□ 0.77
SHC1P29353 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SHC1P29353 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.83■□□□□ 0.77
SHC1P29353 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SHC1P29353 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.83■□□□□ 0.77
SHC1P29353 AC133561.4-201ENST00000566112 224 ntBASIC19.83■□□□□ 0.77
SHC1P29353 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.83■□□□□ 0.77
SHC1P29353 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.83■□□□□ 0.76
SHC1P29353 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SHC1P29353 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SHC1P29353 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
SHC1P29353 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
SHC1P29353 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SHC1P29353 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SHC1P29353 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
SHC1P29353 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
SHC1P29353 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHC1P29353 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.82■□□□□ 0.76
SHC1P29353 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHC1P29353 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms