Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 PPP1R14BP2-201ENST00000426284 444 ntBASIC30.35■■■□□ 2.45
ATF3P18847 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
ATF3P18847 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
ATF3P18847 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
ATF3P18847 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
ATF3P18847 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
ATF3P18847 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC30.34■■■□□ 2.45
ATF3P18847 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC30.34■■■□□ 2.45
ATF3P18847 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC30.34■■■□□ 2.45
ATF3P18847 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
ATF3P18847 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC30.34■■■□□ 2.45
ATF3P18847 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC30.34■■■□□ 2.45
ATF3P18847 MIPEPP3-201ENST00000412105 444 ntBASIC30.34■■■□□ 2.45
ATF3P18847 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC30.34■■■□□ 2.45
ATF3P18847 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
ATF3P18847 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
ATF3P18847 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC30.33■■■□□ 2.45
ATF3P18847 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
ATF3P18847 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
ATF3P18847 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
ATF3P18847 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
ATF3P18847 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC30.33■■■□□ 2.45
ATF3P18847 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC30.33■■■□□ 2.45
ATF3P18847 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC30.33■■■□□ 2.45
ATF3P18847 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
ATF3P18847 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC30.33■■■□□ 2.45
ATF3P18847 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC30.33■■■□□ 2.45
ATF3P18847 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC30.32■■■□□ 2.44
ATF3P18847 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
ATF3P18847 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC30.32■■■□□ 2.44
ATF3P18847 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC30.32■■■□□ 2.44
ATF3P18847 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC30.32■■■□□ 2.44
ATF3P18847 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
ATF3P18847 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
ATF3P18847 USP45-205ENST00000472914 1617 ntTSL 5 BASIC30.32■■■□□ 2.44
ATF3P18847 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
ATF3P18847 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
ATF3P18847 GCSHP5-201ENST00000443090 522 ntBASIC30.31■■■□□ 2.44
ATF3P18847 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC30.31■■■□□ 2.44
ATF3P18847 SERP1-208ENST00000491660 830 ntTSL 2 BASIC30.31■■■□□ 2.44
ATF3P18847 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC30.31■■■□□ 2.44
ATF3P18847 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC30.31■■■□□ 2.44
ATF3P18847 MFF-207ENST00000409565 1548 ntTSL 2 BASIC30.31■■■□□ 2.44
ATF3P18847 AP003733.4-201ENST00000623785 1697 ntBASIC30.3■■■□□ 2.44
ATF3P18847 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
ATF3P18847 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
ATF3P18847 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC30.3■■■□□ 2.44
ATF3P18847 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC30.3■■■□□ 2.44
ATF3P18847 MARS-234ENST00000630571 216 ntTSL 5 BASIC30.3■■■□□ 2.44
ATF3P18847 MARS-235ENST00000630803 183 ntTSL 3 BASIC30.3■■■□□ 2.44
ATF3P18847 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
ATF3P18847 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
ATF3P18847 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
ATF3P18847 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
ATF3P18847 MKRN4P-201ENST00000444706 1521 ntBASIC30.29■■■□□ 2.44
ATF3P18847 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC30.29■■■□□ 2.44
ATF3P18847 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
ATF3P18847 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC30.29■■■□□ 2.44
ATF3P18847 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC30.29■■■□□ 2.44
ATF3P18847 RARRES2P4-201ENST00000514074 484 ntBASIC30.29■■■□□ 2.44
ATF3P18847 IRX5-204ENST00000560154 879 ntTSL 5 BASIC30.29■■■□□ 2.44
ATF3P18847 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
ATF3P18847 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
ATF3P18847 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
ATF3P18847 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC30.29■■■□□ 2.44
ATF3P18847 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
ATF3P18847 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
ATF3P18847 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
ATF3P18847 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC30.28■■■□□ 2.44
ATF3P18847 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
ATF3P18847 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC30.28■■■□□ 2.44
ATF3P18847 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
ATF3P18847 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
ATF3P18847 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
ATF3P18847 AL596275.1-201ENST00000423464 877 ntBASIC30.27■■■□□ 2.44
ATF3P18847 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC30.27■■■□□ 2.44
ATF3P18847 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
ATF3P18847 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
ATF3P18847 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC30.27■■■□□ 2.44
ATF3P18847 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC30.26■■■□□ 2.44
ATF3P18847 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC30.26■■■□□ 2.44
ATF3P18847 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC30.26■■■□□ 2.43
ATF3P18847 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
ATF3P18847 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
ATF3P18847 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC30.26■■■□□ 2.43
ATF3P18847 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC30.26■■■□□ 2.43
ATF3P18847 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC30.26■■■□□ 2.43
ATF3P18847 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC30.26■■■□□ 2.43
ATF3P18847 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC30.26■■■□□ 2.43
ATF3P18847 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC30.25■■■□□ 2.43
ATF3P18847 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
ATF3P18847 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC30.25■■■□□ 2.43
ATF3P18847 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
ATF3P18847 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
ATF3P18847 AC013268.1-206ENST00000638368 961 ntBASIC30.25■■■□□ 2.43
ATF3P18847 AC112229.1-201ENST00000639295 961 ntBASIC30.25■■■□□ 2.43
ATF3P18847 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
ATF3P18847 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
ATF3P18847 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC30.25■■■□□ 2.43
ATF3P18847 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC30.25■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms