Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.67■□□□□ 0.9
TPRP12270 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TPRP12270 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TPRP12270 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TPRP12270 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TPRP12270 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.67■□□□□ 0.9
TPRP12270 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TPRP12270 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
TPRP12270 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TPRP12270 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TPRP12270 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TPRP12270 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TPRP12270 AC091874.3-201ENST00000512672 1195 ntBASIC20.67■□□□□ 0.9
TPRP12270 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TPRP12270 AC133561.5-201ENST00000635547 218 ntBASIC20.67■□□□□ 0.9
TPRP12270 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
TPRP12270 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.67■□□□□ 0.9
TPRP12270 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.67■□□□□ 0.9
TPRP12270 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.66■□□□□ 0.9
TPRP12270 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TPRP12270 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
TPRP12270 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
TPRP12270 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.66■□□□□ 0.9
TPRP12270 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
TPRP12270 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
TPRP12270 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.66■□□□□ 0.9
TPRP12270 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TPRP12270 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TPRP12270 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TPRP12270 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TPRP12270 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.65■□□□□ 0.9
TPRP12270 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
TPRP12270 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.65■□□□□ 0.9
TPRP12270 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.65■□□□□ 0.9
TPRP12270 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TPRP12270 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TPRP12270 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TPRP12270 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TPRP12270 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TPRP12270 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TPRP12270 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.65■□□□□ 0.9
TPRP12270 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TPRP12270 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TPRP12270 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TPRP12270 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.64■□□□□ 0.9
TPRP12270 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TPRP12270 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TPRP12270 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.64■□□□□ 0.89
TPRP12270 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TPRP12270 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TPRP12270 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.64■□□□□ 0.89
TPRP12270 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TPRP12270 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TPRP12270 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TPRP12270 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TPRP12270 AC012306.2-201ENST00000609350 630 ntBASIC20.64■□□□□ 0.89
TPRP12270 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.64■□□□□ 0.89
TPRP12270 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TPRP12270 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TPRP12270 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
TPRP12270 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TPRP12270 AC068338.2-201ENST00000563278 1430 ntBASIC20.63■□□□□ 0.89
TPRP12270 ERN1-208ENST00000606895 2068 ntBASIC20.63■□□□□ 0.89
TPRP12270 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TPRP12270 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.63■□□□□ 0.89
TPRP12270 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.63■□□□□ 0.89
TPRP12270 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.63■□□□□ 0.89
TPRP12270 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.63■□□□□ 0.89
TPRP12270 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TPRP12270 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.62■□□□□ 0.89
TPRP12270 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPRP12270 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TPRP12270 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TPRP12270 AC016405.3-201ENST00000607710 860 ntBASIC20.62■□□□□ 0.89
TPRP12270 AL359736.2-201ENST00000621992 437 ntBASIC20.62■□□□□ 0.89
TPRP12270 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TPRP12270 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.62■□□□□ 0.89
TPRP12270 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPRP12270 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
TPRP12270 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TPRP12270 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TPRP12270 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
TPRP12270 BX276092.2-201ENST00000417668 665 ntBASIC20.61■□□□□ 0.89
TPRP12270 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TPRP12270 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TPRP12270 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.61■□□□□ 0.89
TPRP12270 AP001160.3-201ENST00000601484 763 ntBASIC20.61■□□□□ 0.89
TPRP12270 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TPRP12270 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TPRP12270 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TPRP12270 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TPRP12270 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.61■□□□□ 0.89
TPRP12270 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TPRP12270 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
TPRP12270 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TPRP12270 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TPRP12270 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TPRP12270 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TPRP12270 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TPRP12270 AC097658.1-201ENST00000475555 843 ntBASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms