Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.63■□□□□ 0.41
CLN5O75503 AC242852.2-201ENST00000615738 1807 ntBASIC17.63■□□□□ 0.41
CLN5O75503 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.62■□□□□ 0.41
CLN5O75503 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLN5O75503 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLN5O75503 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CLN5O75503 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLN5O75503 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CLN5O75503 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CLN5O75503 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.62■□□□□ 0.41
CLN5O75503 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLN5O75503 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLN5O75503 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLN5O75503 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLN5O75503 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC17.62■□□□□ 0.41
CLN5O75503 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC17.62■□□□□ 0.41
CLN5O75503 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CLN5O75503 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLN5O75503 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLN5O75503 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
CLN5O75503 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLN5O75503 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLN5O75503 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CLN5O75503 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.62■□□□□ 0.41
CLN5O75503 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLN5O75503 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLN5O75503 ESRRAP2-201ENST00000418437 1549 ntBASIC17.62■□□□□ 0.41
CLN5O75503 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLN5O75503 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLN5O75503 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLN5O75503 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CLN5O75503 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.61■□□□□ 0.41
CLN5O75503 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLN5O75503 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.61■□□□□ 0.41
CLN5O75503 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLN5O75503 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLN5O75503 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLN5O75503 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLN5O75503 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CLN5O75503 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLN5O75503 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLN5O75503 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLN5O75503 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC17.61■□□□□ 0.41
CLN5O75503 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.61■□□□□ 0.41
CLN5O75503 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.61■□□□□ 0.41
CLN5O75503 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLN5O75503 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.6■□□□□ 0.41
CLN5O75503 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.6■□□□□ 0.41
CLN5O75503 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLN5O75503 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC17.6■□□□□ 0.41
CLN5O75503 AL033527.3-201ENST00000566366 1196 ntBASIC17.6■□□□□ 0.41
CLN5O75503 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC17.6■□□□□ 0.41
CLN5O75503 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLN5O75503 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
CLN5O75503 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CLN5O75503 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLN5O75503 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.6■□□□□ 0.41
CLN5O75503 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLN5O75503 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLN5O75503 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
CLN5O75503 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLN5O75503 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLN5O75503 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLN5O75503 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CLN5O75503 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLN5O75503 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.59■□□□□ 0.41
CLN5O75503 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLN5O75503 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.59■□□□□ 0.41
CLN5O75503 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLN5O75503 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLN5O75503 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CLN5O75503 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
CLN5O75503 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
CLN5O75503 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLN5O75503 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLN5O75503 YBX1P4-201ENST00000392794 808 ntBASIC17.58■□□□□ 0.4
CLN5O75503 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLN5O75503 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLN5O75503 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.58■□□□□ 0.4
CLN5O75503 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.58■□□□□ 0.4
CLN5O75503 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLN5O75503 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.58■□□□□ 0.4
CLN5O75503 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLN5O75503 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLN5O75503 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CLN5O75503 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.57■□□□□ 0.4
CLN5O75503 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.57■□□□□ 0.4
CLN5O75503 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CLN5O75503 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLN5O75503 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLN5O75503 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLN5O75503 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLN5O75503 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.57■□□□□ 0.4
CLN5O75503 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLN5O75503 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CLN5O75503 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.57■□□□□ 0.4
CLN5O75503 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CLN5O75503 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLN5O75503 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLN5O75503 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms