Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SSSCA1O60232 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSSCA1O60232 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSSCA1O60232 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSSCA1O60232 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SSSCA1O60232 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSSCA1O60232 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SSSCA1O60232 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.69■□□□□ 0.42
SSSCA1O60232 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.69■□□□□ 0.42
SSSCA1O60232 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.69■□□□□ 0.42
SSSCA1O60232 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSSCA1O60232 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSSCA1O60232 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC17.69■□□□□ 0.42
SSSCA1O60232 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSSCA1O60232 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSSCA1O60232 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSSCA1O60232 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC17.69■□□□□ 0.42
SSSCA1O60232 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.69■□□□□ 0.42
SSSCA1O60232 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SSSCA1O60232 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSSCA1O60232 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSSCA1O60232 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SSSCA1O60232 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSSCA1O60232 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SSSCA1O60232 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSSCA1O60232 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSSCA1O60232 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SSSCA1O60232 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSSCA1O60232 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SSSCA1O60232 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC17.68■□□□□ 0.42
SSSCA1O60232 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SSSCA1O60232 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SSSCA1O60232 MIR4449-201ENST00000578365 66 ntBASIC17.68■□□□□ 0.42
SSSCA1O60232 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SSSCA1O60232 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSSCA1O60232 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSSCA1O60232 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSSCA1O60232 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SSSCA1O60232 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SSSCA1O60232 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSSCA1O60232 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SSSCA1O60232 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SSSCA1O60232 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SSSCA1O60232 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSSCA1O60232 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SSSCA1O60232 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSSCA1O60232 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SSSCA1O60232 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSSCA1O60232 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.67■□□□□ 0.42
SSSCA1O60232 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SSSCA1O60232 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.67■□□□□ 0.42
SSSCA1O60232 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
SSSCA1O60232 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSSCA1O60232 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.67■□□□□ 0.42
SSSCA1O60232 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SSSCA1O60232 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSSCA1O60232 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SSSCA1O60232 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSSCA1O60232 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSSCA1O60232 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SSSCA1O60232 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SSSCA1O60232 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSSCA1O60232 AC129492.7-201ENST00000622992 756 ntBASIC17.66■□□□□ 0.42
SSSCA1O60232 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SSSCA1O60232 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.66■□□□□ 0.42
SSSCA1O60232 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SSSCA1O60232 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SSSCA1O60232 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSSCA1O60232 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSSCA1O60232 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSSCA1O60232 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC17.66■□□□□ 0.42
SSSCA1O60232 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.65■□□□□ 0.42
SSSCA1O60232 LINC01529-204ENST00000636474 1715 ntBASIC17.65■□□□□ 0.42
SSSCA1O60232 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSSCA1O60232 AC139795.1-202ENST00000500444 432 ntBASIC17.65■□□□□ 0.42
SSSCA1O60232 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SSSCA1O60232 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.65■□□□□ 0.42
SSSCA1O60232 MIR4281-201ENST00000580852 62 ntBASIC17.65■□□□□ 0.42
SSSCA1O60232 AC019171.1-201ENST00000601251 1056 ntBASIC17.65■□□□□ 0.42
SSSCA1O60232 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.65■□□□□ 0.42
SSSCA1O60232 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSSCA1O60232 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSSCA1O60232 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.65■□□□□ 0.42
SSSCA1O60232 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSSCA1O60232 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SSSCA1O60232 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
SSSCA1O60232 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SSSCA1O60232 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSSCA1O60232 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC17.64■□□□□ 0.41
SSSCA1O60232 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.64■□□□□ 0.41
SSSCA1O60232 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC17.64■□□□□ 0.41
SSSCA1O60232 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SSSCA1O60232 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.64■□□□□ 0.41
SSSCA1O60232 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.64■□□□□ 0.41
SSSCA1O60232 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSSCA1O60232 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSSCA1O60232 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSSCA1O60232 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.63■□□□□ 0.41
SSSCA1O60232 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSSCA1O60232 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms