Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PAX4O43316 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC15.47■□□□□ 0.07
PAX4O43316 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC15.47■□□□□ 0.07
PAX4O43316 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PAX4O43316 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PAX4O43316 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC15.47■□□□□ 0.07
PAX4O43316 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PAX4O43316 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PAX4O43316 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PAX4O43316 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC15.46■□□□□ 0.07
PAX4O43316 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
PAX4O43316 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
PAX4O43316 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PAX4O43316 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PAX4O43316 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC15.46■□□□□ 0.07
PAX4O43316 AC011298.3-201ENST00000615796 283 ntBASIC15.46■□□□□ 0.07
PAX4O43316 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC15.46■□□□□ 0.07
PAX4O43316 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PAX4O43316 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC15.46■□□□□ 0.07
PAX4O43316 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
PAX4O43316 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
PAX4O43316 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC15.46■□□□□ 0.06
PAX4O43316 COMT-203ENST00000403184 2217 ntTSL 2 BASIC15.45■□□□□ 0.06
PAX4O43316 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PAX4O43316 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PAX4O43316 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.45■□□□□ 0.06
PAX4O43316 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC15.45■□□□□ 0.06
PAX4O43316 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PAX4O43316 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC15.45■□□□□ 0.06
PAX4O43316 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PAX4O43316 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PAX4O43316 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PAX4O43316 AL136162.1-201ENST00000607711 1078 ntBASIC15.45■□□□□ 0.06
PAX4O43316 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
PAX4O43316 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
PAX4O43316 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PAX4O43316 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC15.45■□□□□ 0.06
PAX4O43316 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
PAX4O43316 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PAX4O43316 C1orf229-201ENST00000623686 2258 ntBASIC15.45■□□□□ 0.06
PAX4O43316 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PAX4O43316 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PAX4O43316 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PAX4O43316 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PAX4O43316 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PAX4O43316 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PAX4O43316 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PAX4O43316 PTMA-205ENST00000410064 814 ntTSL 2 BASIC15.44■□□□□ 0.06
PAX4O43316 AC096631.2-201ENST00000436136 790 ntBASIC15.44■□□□□ 0.06
PAX4O43316 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PAX4O43316 AC136469.2-201ENST00000623944 1028 ntBASIC15.44■□□□□ 0.06
PAX4O43316 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC15.44■□□□□ 0.06
PAX4O43316 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PAX4O43316 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
PAX4O43316 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PAX4O43316 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PAX4O43316 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PAX4O43316 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PAX4O43316 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC15.43■□□□□ 0.06
PAX4O43316 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC15.43■□□□□ 0.06
PAX4O43316 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PAX4O43316 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PAX4O43316 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PAX4O43316 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
PAX4O43316 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PAX4O43316 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PAX4O43316 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PAX4O43316 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PAX4O43316 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC15.43■□□□□ 0.06
PAX4O43316 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PAX4O43316 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PAX4O43316 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PAX4O43316 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC15.43■□□□□ 0.06
PAX4O43316 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC15.43■□□□□ 0.06
PAX4O43316 RALB-208ENST00000631312 311 ntTSL 5 BASIC15.43■□□□□ 0.06
PAX4O43316 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC15.43■□□□□ 0.06
PAX4O43316 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PAX4O43316 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC15.43■□□□□ 0.06
PAX4O43316 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PAX4O43316 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PAX4O43316 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PAX4O43316 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PAX4O43316 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC15.43■□□□□ 0.06
PAX4O43316 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
PAX4O43316 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PAX4O43316 AC135279.3-201ENST00000610945 1311 ntBASIC15.43■□□□□ 0.06
PAX4O43316 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PAX4O43316 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
PAX4O43316 LINC01960-201ENST00000563759 1884 ntBASIC15.42■□□□□ 0.06
PAX4O43316 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
PAX4O43316 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PAX4O43316 NALT1-201ENST00000429224 738 ntTSL 5 BASIC15.42■□□□□ 0.06
PAX4O43316 PBX2P1-201ENST00000493219 1291 ntBASIC15.42■□□□□ 0.06
PAX4O43316 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PAX4O43316 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PAX4O43316 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PAX4O43316 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PAX4O43316 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PAX4O43316 ESRRAP2-201ENST00000418437 1549 ntBASIC15.42■□□□□ 0.06
PAX4O43316 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms