Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRBV7-1A0A0A6YYK4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV7-1A0A0A6YYK4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV7-1A0A0A6YYK4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC16.89■□□□□ 0.29
TRBV7-1A0A0A6YYK4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV7-1A0A0A6YYK4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV7-1A0A0A6YYK4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV7-1A0A0A6YYK4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.89■□□□□ 0.29
TRBV7-1A0A0A6YYK4 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
TRBV7-1A0A0A6YYK4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.89■□□□□ 0.29
TRBV7-1A0A0A6YYK4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.89■□□□□ 0.29
TRBV7-1A0A0A6YYK4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC16.89■□□□□ 0.29
TRBV7-1A0A0A6YYK4 AC079089.2-201ENST00000531211 1277 ntBASIC16.89■□□□□ 0.29
TRBV7-1A0A0A6YYK4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
TRBV7-1A0A0A6YYK4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TRBV7-1A0A0A6YYK4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV7-1A0A0A6YYK4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.89■□□□□ 0.29
TRBV7-1A0A0A6YYK4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV7-1A0A0A6YYK4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV7-1A0A0A6YYK4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV7-1A0A0A6YYK4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV7-1A0A0A6YYK4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV7-1A0A0A6YYK4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC16.88■□□□□ 0.29
TRBV7-1A0A0A6YYK4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC16.88■□□□□ 0.29
TRBV7-1A0A0A6YYK4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.88■□□□□ 0.29
TRBV7-1A0A0A6YYK4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV7-1A0A0A6YYK4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TRBV7-1A0A0A6YYK4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC16.88■□□□□ 0.29
TRBV7-1A0A0A6YYK4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC16.88■□□□□ 0.29
TRBV7-1A0A0A6YYK4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV7-1A0A0A6YYK4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TRBV7-1A0A0A6YYK4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV7-1A0A0A6YYK4 BX842568.3-201ENST00000418104 571 ntBASIC16.88■□□□□ 0.29
TRBV7-1A0A0A6YYK4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC16.88■□□□□ 0.29
TRBV7-1A0A0A6YYK4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.88■□□□□ 0.29
TRBV7-1A0A0A6YYK4 MIR4767-201ENST00000582827 78 ntBASIC16.88■□□□□ 0.29
TRBV7-1A0A0A6YYK4 AC010525.1-201ENST00000585559 441 ntBASIC16.88■□□□□ 0.29
TRBV7-1A0A0A6YYK4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV7-1A0A0A6YYK4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC16.88■□□□□ 0.29
TRBV7-1A0A0A6YYK4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV7-1A0A0A6YYK4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV7-1A0A0A6YYK4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRBV7-1A0A0A6YYK4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
TRBV7-1A0A0A6YYK4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRBV7-1A0A0A6YYK4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
TRBV7-1A0A0A6YYK4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV7-1A0A0A6YYK4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC16.87■□□□□ 0.29
TRBV7-1A0A0A6YYK4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV7-1A0A0A6YYK4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TRBV7-1A0A0A6YYK4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC16.87■□□□□ 0.29
TRBV7-1A0A0A6YYK4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV7-1A0A0A6YYK4 SLC47A1P1-202ENST00000449666 945 ntBASIC16.87■□□□□ 0.29
TRBV7-1A0A0A6YYK4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.87■□□□□ 0.29
TRBV7-1A0A0A6YYK4 AC024257.2-201ENST00000549699 147 ntBASIC16.87■□□□□ 0.29
TRBV7-1A0A0A6YYK4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC16.87■□□□□ 0.29
TRBV7-1A0A0A6YYK4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV7-1A0A0A6YYK4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV7-1A0A0A6YYK4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV7-1A0A0A6YYK4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TRBV7-1A0A0A6YYK4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV7-1A0A0A6YYK4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC16.87■□□□□ 0.29
TRBV7-1A0A0A6YYK4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV7-1A0A0A6YYK4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV7-1A0A0A6YYK4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV7-1A0A0A6YYK4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV7-1A0A0A6YYK4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV7-1A0A0A6YYK4 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV7-1A0A0A6YYK4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV7-1A0A0A6YYK4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
TRBV7-1A0A0A6YYK4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV7-1A0A0A6YYK4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV7-1A0A0A6YYK4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC16.86■□□□□ 0.29
TRBV7-1A0A0A6YYK4 AC096631.2-201ENST00000436136 790 ntBASIC16.86■□□□□ 0.29
TRBV7-1A0A0A6YYK4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.86■□□□□ 0.29
TRBV7-1A0A0A6YYK4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.86■□□□□ 0.29
TRBV7-1A0A0A6YYK4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC16.86■□□□□ 0.29
TRBV7-1A0A0A6YYK4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC16.86■□□□□ 0.29
TRBV7-1A0A0A6YYK4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV7-1A0A0A6YYK4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV7-1A0A0A6YYK4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV7-1A0A0A6YYK4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV7-1A0A0A6YYK4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV7-1A0A0A6YYK4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV7-1A0A0A6YYK4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC16.85■□□□□ 0.29
TRBV7-1A0A0A6YYK4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV7-1A0A0A6YYK4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV7-1A0A0A6YYK4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV7-1A0A0A6YYK4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV7-1A0A0A6YYK4 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV7-1A0A0A6YYK4 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC16.85■□□□□ 0.29
TRBV7-1A0A0A6YYK4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.85■□□□□ 0.29
TRBV7-1A0A0A6YYK4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.85■□□□□ 0.29
TRBV7-1A0A0A6YYK4 PBX2P1-201ENST00000493219 1291 ntBASIC16.85■□□□□ 0.29
TRBV7-1A0A0A6YYK4 AC233992.3-201ENST00000607491 485 ntBASIC16.85■□□□□ 0.29
TRBV7-1A0A0A6YYK4 AC106739.1-201ENST00000617035 715 ntBASIC16.85■□□□□ 0.29
TRBV7-1A0A0A6YYK4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV7-1A0A0A6YYK4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV7-1A0A0A6YYK4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV7-1A0A0A6YYK4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TRBV7-1A0A0A6YYK4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms