Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC090825.2-201ENST00000557959 739 ntBASIC11.51□□□□□ -0.57
P04436 AC106782.3-201ENST00000563429 258 ntBASIC11.51□□□□□ -0.57
P04436 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC11.51□□□□□ -0.57
P04436 AC087072.1-201ENST00000603727 421 ntBASIC11.51□□□□□ -0.57
P04436 AC010326.4-202ENST00000603829 541 ntBASIC11.51□□□□□ -0.57
P04436 AC010326.4-201ENST00000604665 891 ntBASIC11.51□□□□□ -0.57
P04436 AC022146.2-201ENST00000605980 348 ntTSL 3 BASIC11.51□□□□□ -0.57
P04436 AL353626.2-201ENST00000615372 130 ntBASIC11.51□□□□□ -0.57
P04436 AC138430.2-201ENST00000624068 504 ntBASIC11.51□□□□□ -0.57
P04436 AC005865.2-202ENST00000635814 725 ntBASIC11.51□□□□□ -0.57
P04436 GNL3-201ENST00000394799 2041 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
P04436 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04436 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P04436 STAG1-203ENST00000434713 5064 ntTSL 5 BASIC11.51□□□□□ -0.57
P04436 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P04436 TUBB8-207ENST00000568866 1367 ntTSL 5 BASIC11.51□□□□□ -0.57
P04436 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC11.51□□□□□ -0.57
P04436 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC11.51□□□□□ -0.57
P04436 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
P04436 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04436 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC11.51□□□□□ -0.57
P04436 LNP1-201ENST00000383693 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04436 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC11.51□□□□□ -0.57
P04436 CNMD-201ENST00000377962 1410 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04436 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04436 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04436 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
P04436 LUZP1-201ENST00000302291 8898 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
P04436 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04436 AC004585.2-201ENST00000624090 1473 ntBASIC11.51□□□□□ -0.57
P04436 COL8A1-201ENST00000261037 5705 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04436 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04436 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC11.5□□□□□ -0.57
P04436 AP5S1-205ENST00000615891 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04436 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P04436 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC11.5□□□□□ -0.57
P04436 KIF14-201ENST00000367350 7274 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
P04436 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04436 IL17RB-201ENST00000288167 2010 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04436 DNAJB8-202ENST00000469083 3365 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
P04436 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC11.5□□□□□ -0.57
P04436 TBC1D3B-202ENST00000611257 2081 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04436 CCT7P1-201ENST00000406551 1611 ntBASIC11.5□□□□□ -0.57
P04436 CDK16-201ENST00000276052 3016 ntTSL 2 BASIC11.5□□□□□ -0.57
P04436 LOXHD1-210ENST00000536736 6848 ntAPPRIS P5 TSL 5 BASIC11.5□□□□□ -0.57
P04436 ALG8-201ENST00000299626 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04436 AC007598.3-201ENST00000623077 1678 ntBASIC11.5□□□□□ -0.57
P04436 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04436 AGAP6-203ENST00000618025 2690 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
P04436 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04436 FOXJ3-201ENST00000361346 5225 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04436 FAM96A-201ENST00000300030 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04436 PRY-201ENST00000303728 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04436 PRY2-201ENST00000303804 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04436 PRYP3-201ENST00000343584 1063 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P04436 HIST1H1C-201ENST00000343677 642 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
P04436 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04436 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04436 IL32-204ENST00000396887 789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04436 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC11.5□□□□□ -0.57
P04436 HTR3D-203ENST00000428798 1215 ntTSL 5 BASIC11.5□□□□□ -0.57
P04436 AL663070.1-201ENST00000438210 725 ntBASIC11.5□□□□□ -0.57
P04436 HTR3D-204ENST00000453435 1043 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P04436 IGHV3-6-201ENST00000518407 347 ntBASIC11.5□□□□□ -0.57
P04436 IGHVII-65-1-201ENST00000519992 302 ntBASIC11.5□□□□□ -0.57
P04436 MST1L-204ENST00000545160 559 ntTSL 4 BASIC11.5□□□□□ -0.57
P04436 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC11.5□□□□□ -0.57
P04436 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC11.5□□□□□ -0.57
P04436 AC103706.1-201ENST00000561761 679 ntBASIC11.5□□□□□ -0.57
P04436 AC002519.2-201ENST00000563575 539 ntTSL 4 BASIC11.5□□□□□ -0.57
P04436 ELP5-210ENST00000573657 687 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P04436 MED11-203ENST00000575284 652 ntTSL 3 BASIC11.5□□□□□ -0.57
P04436 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
P04436 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC11.5□□□□□ -0.57
P04436 IFNL3P1-201ENST00000595082 501 ntBASIC11.5□□□□□ -0.57
P04436 AC063977.2-201ENST00000601996 421 ntBASIC11.5□□□□□ -0.57
P04436 LINC01206-212ENST00000609168 988 ntTSL 5 BASIC11.5□□□□□ -0.57
P04436 AC091941.1-201ENST00000623003 576 ntBASIC11.5□□□□□ -0.57
P04436 FAM92B-203ENST00000629253 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04436 CDIPT-AS1-203ENST00000638164 713 ntBASIC11.5□□□□□ -0.57
P04436 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
P04436 DBF4B-202ENST00000393547 1810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04436 LIF-201ENST00000249075 3969 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04436 SPTLC1-201ENST00000262554 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04436 TCOF1-205ENST00000439160 4644 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
P04436 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04436 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
P04436 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04436 TMEM136-201ENST00000314475 1434 ntTSL 2 BASIC11.5□□□□□ -0.57
P04436 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
P04436 NBEAP3-201ENST00000420638 1493 ntBASIC11.5□□□□□ -0.57
P04436 MPI-207ENST00000563422 1481 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P04436 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04436 KCTD21-AS1-207ENST00000600795 1549 ntBASIC11.5□□□□□ -0.57
P04436 RAB6A-201ENST00000310653 3389 ntAPPRIS P5 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04436 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC11.5□□□□□ -0.57
P04436 AC107375.1-201ENST00000564464 2231 ntBASIC11.5□□□□□ -0.57
P04436 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P04436 CTNS-201ENST00000046640 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04436 PCDHB11-201ENST00000354757 4198 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms