Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
NCDNQ9UBB6 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
NCDNQ9UBB6 DHRS1-202ENST00000396813 1470 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
NCDNQ9UBB6 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NCDNQ9UBB6 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC12.57□□□□□ -0.4
NCDNQ9UBB6 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NCDNQ9UBB6 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NCDNQ9UBB6 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
NCDNQ9UBB6 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
NCDNQ9UBB6 NELL2-203ENST00000429094 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NCDNQ9UBB6 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NCDNQ9UBB6 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NCDNQ9UBB6 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
NCDNQ9UBB6 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NCDNQ9UBB6 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.57□□□□□ -0.4
NCDNQ9UBB6 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NCDNQ9UBB6 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NCDNQ9UBB6 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NCDNQ9UBB6 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NCDNQ9UBB6 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 PAX6-217ENST00000481563 1587 ntTSL 5 BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 AC100774.1-201ENST00000565581 1603 ntBASIC12.56□□□□□ -0.4
NCDNQ9UBB6 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 AC010970.1-201ENST00000445125 1848 ntBASIC12.56□□□□□ -0.4
NCDNQ9UBB6 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 FTO-214ENST00000636218 2227 ntTSL 5 BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 PMF1-BGLAP-201ENST00000320139 773 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 TXNRD3NB-201ENST00000404489 738 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 AP001610.1-201ENST00000411427 1116 ntTSL 5 BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 KCNE1-205ENST00000416357 796 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 HTR3D-203ENST00000428798 1215 ntTSL 5 BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 AC024028.1-201ENST00000437145 437 ntTSL 3 BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 HTR3D-204ENST00000453435 1043 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 AC104445.1-201ENST00000460597 749 ntTSL 3 BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 POU5F1-205ENST00000512818 1233 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 AC245884.7-201ENST00000514037 356 ntBASIC12.56□□□□□ -0.4
NCDNQ9UBB6 SDHD-204ENST00000528021 1071 ntTSL 3 BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 SDHD-205ENST00000528048 905 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 AP001107.8-201ENST00000530805 479 ntTSL 3 BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 ADIPOR1P2-201ENST00000554199 820 ntBASIC12.56□□□□□ -0.4
NCDNQ9UBB6 DIO2-206ENST00000555750 1049 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 AC019254.1-202ENST00000558515 645 ntTSL 3 BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 PSME1-210ENST00000561435 945 ntTSL 2 BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 AC100830.3-201ENST00000583044 554 ntBASIC12.56□□□□□ -0.4
NCDNQ9UBB6 CNDP2-228ENST00000584768 897 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 AL589843.2-202ENST00000602289 740 ntBASIC12.56□□□□□ -0.4
NCDNQ9UBB6 PCGF2-205ENST00000618506 1196 ntTSL 5 BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 AC024580.2-201ENST00000623363 231 ntBASIC12.56□□□□□ -0.4
NCDNQ9UBB6 AC026401.3-201ENST00000624682 882 ntBASIC12.56□□□□□ -0.4
NCDNQ9UBB6 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 POM121L4P-202ENST00000427789 1891 ntBASIC12.56□□□□□ -0.4
NCDNQ9UBB6 BTNL8-202ENST00000340184 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 LINC00638-201ENST00000555578 2518 ntBASIC12.56□□□□□ -0.4
NCDNQ9UBB6 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 CCRL2-202ENST00000399036 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 EGLN3-205ENST00000547327 2849 ntBASIC12.56□□□□□ -0.4
NCDNQ9UBB6 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 NAP1L1-206ENST00000544816 1597 ntTSL 2 BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NCDNQ9UBB6 YAP1P1-201ENST00000401504 1393 ntBASIC12.56□□□□□ -0.4
NCDNQ9UBB6 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
NCDNQ9UBB6 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.55□□□□□ -0.4
NCDNQ9UBB6 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NCDNQ9UBB6 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NCDNQ9UBB6 KATNAL2-202ENST00000356157 1635 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
NCDNQ9UBB6 SCHIP1-201ENST00000445224 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NCDNQ9UBB6 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
NCDNQ9UBB6 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
NCDNQ9UBB6 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NCDNQ9UBB6 CNTF-201ENST00000361987 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NCDNQ9UBB6 USP33-204ENST00000370794 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NCDNQ9UBB6 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.55□□□□□ -0.4
NCDNQ9UBB6 ZNF124-201ENST00000340684 1674 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
NCDNQ9UBB6 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.55□□□□□ -0.4
NCDNQ9UBB6 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NCDNQ9UBB6 LDLRAD1-203ENST00000420619 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
NCDNQ9UBB6 MPI-208ENST00000563786 1707 ntTSL 5 BASIC12.55□□□□□ -0.4
NCDNQ9UBB6 CMIP-211ENST00000621537 4000 ntTSL 5 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms