Protein–RNA interactions for Protein: Q9Y6X0

SETBP1, SET-binding protein, humanhuman

Predictions only

Length 1,596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETBP1Q9Y6X0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
SETBP1Q9Y6X0 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
SETBP1Q9Y6X0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
SETBP1Q9Y6X0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC31.3■■■□□ 2.6
SETBP1Q9Y6X0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC31.3■■■□□ 2.6
SETBP1Q9Y6X0 GUSBP6-202ENST00000438529 1198 ntBASIC31.3■■■□□ 2.6
SETBP1Q9Y6X0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
SETBP1Q9Y6X0 AC010141.3-201ENST00000456659 717 ntBASIC31.3■■■□□ 2.6
SETBP1Q9Y6X0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
SETBP1Q9Y6X0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC31.3■■■□□ 2.6
SETBP1Q9Y6X0 AC142086.2-201ENST00000569753 217 ntBASIC31.3■■■□□ 2.6
SETBP1Q9Y6X0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC31.3■■■□□ 2.6
SETBP1Q9Y6X0 AC011767.1-201ENST00000617410 1153 ntBASIC31.3■■■□□ 2.6
SETBP1Q9Y6X0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
SETBP1Q9Y6X0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC31.3■■■□□ 2.6
SETBP1Q9Y6X0 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC31.29■■■□□ 2.6
SETBP1Q9Y6X0 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SETBP1Q9Y6X0 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SETBP1Q9Y6X0 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
SETBP1Q9Y6X0 AC087239.1-201ENST00000622671 572 ntBASIC31.29■■■□□ 2.6
SETBP1Q9Y6X0 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
SETBP1Q9Y6X0 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
SETBP1Q9Y6X0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC31.28■■■□□ 2.6
SETBP1Q9Y6X0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC31.28■■■□□ 2.6
SETBP1Q9Y6X0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
SETBP1Q9Y6X0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
SETBP1Q9Y6X0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
SETBP1Q9Y6X0 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC31.27■■■□□ 2.6
SETBP1Q9Y6X0 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
SETBP1Q9Y6X0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SETBP1Q9Y6X0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC31.27■■■□□ 2.6
SETBP1Q9Y6X0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
SETBP1Q9Y6X0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
SETBP1Q9Y6X0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC31.26■■■□□ 2.6
SETBP1Q9Y6X0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC31.26■■■□□ 2.6
SETBP1Q9Y6X0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC31.26■■■□□ 2.6
SETBP1Q9Y6X0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC31.26■■■□□ 2.6
SETBP1Q9Y6X0 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC31.26■■■□□ 2.6
SETBP1Q9Y6X0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC31.26■■■□□ 2.6
SETBP1Q9Y6X0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
SETBP1Q9Y6X0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
SETBP1Q9Y6X0 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.59
SETBP1Q9Y6X0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC31.26■■■□□ 2.59
SETBP1Q9Y6X0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
SETBP1Q9Y6X0 AC079140.4-201ENST00000507448 529 ntBASIC31.26■■■□□ 2.59
SETBP1Q9Y6X0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC31.26■■■□□ 2.59
SETBP1Q9Y6X0 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC31.25■■■□□ 2.59
SETBP1Q9Y6X0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC31.25■■■□□ 2.59
SETBP1Q9Y6X0 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
SETBP1Q9Y6X0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
SETBP1Q9Y6X0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SETBP1Q9Y6X0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SETBP1Q9Y6X0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC31.24■■■□□ 2.59
SETBP1Q9Y6X0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SETBP1Q9Y6X0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SETBP1Q9Y6X0 SLC7A5P2-201ENST00000553010 536 ntBASIC31.24■■■□□ 2.59
SETBP1Q9Y6X0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
SETBP1Q9Y6X0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC31.24■■■□□ 2.59
SETBP1Q9Y6X0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SETBP1Q9Y6X0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC31.23■■■□□ 2.59
SETBP1Q9Y6X0 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SETBP1Q9Y6X0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SETBP1Q9Y6X0 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
SETBP1Q9Y6X0 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC31.23■■■□□ 2.59
SETBP1Q9Y6X0 TESC-206ENST00000541210 936 ntTSL 3 BASIC31.22■■■□□ 2.59
SETBP1Q9Y6X0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
SETBP1Q9Y6X0 AL353803.4-201ENST00000565882 1934 ntBASIC31.22■■■□□ 2.59
SETBP1Q9Y6X0 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
SETBP1Q9Y6X0 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
SETBP1Q9Y6X0 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
SETBP1Q9Y6X0 KRT87P-202ENST00000534226 1464 ntBASIC31.22■■■□□ 2.59
SETBP1Q9Y6X0 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
SETBP1Q9Y6X0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC31.22■■■□□ 2.59
SETBP1Q9Y6X0 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SETBP1Q9Y6X0 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SETBP1Q9Y6X0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
SETBP1Q9Y6X0 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC31.21■■■□□ 2.59
SETBP1Q9Y6X0 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC31.21■■■□□ 2.59
SETBP1Q9Y6X0 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC31.21■■■□□ 2.59
SETBP1Q9Y6X0 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC31.2■■■□□ 2.59
SETBP1Q9Y6X0 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC31.2■■■□□ 2.59
SETBP1Q9Y6X0 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
SETBP1Q9Y6X0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC31.2■■■□□ 2.58
SETBP1Q9Y6X0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
SETBP1Q9Y6X0 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC31.2■■■□□ 2.58
SETBP1Q9Y6X0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC31.2■■■□□ 2.58
SETBP1Q9Y6X0 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
SETBP1Q9Y6X0 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
SETBP1Q9Y6X0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC31.2■■■□□ 2.58
SETBP1Q9Y6X0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
SETBP1Q9Y6X0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
SETBP1Q9Y6X0 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC31.19■■■□□ 2.58
SETBP1Q9Y6X0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC31.19■■■□□ 2.58
SETBP1Q9Y6X0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
SETBP1Q9Y6X0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SETBP1Q9Y6X0 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
SETBP1Q9Y6X0 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC31.19■■■□□ 2.58
SETBP1Q9Y6X0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
SETBP1Q9Y6X0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC31.18■■■□□ 2.58
SETBP1Q9Y6X0 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms