Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLIRPQ9GZT3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SLIRPQ9GZT3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
SLIRPQ9GZT3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLIRPQ9GZT3 AC144652.1-201ENST00000609974 1624 ntBASIC19.25■□□□□ 0.67
SLIRPQ9GZT3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLIRPQ9GZT3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLIRPQ9GZT3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLIRPQ9GZT3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLIRPQ9GZT3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLIRPQ9GZT3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SLIRPQ9GZT3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.25■□□□□ 0.67
SLIRPQ9GZT3 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLIRPQ9GZT3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SLIRPQ9GZT3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.25■□□□□ 0.67
SLIRPQ9GZT3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLIRPQ9GZT3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SLIRPQ9GZT3 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLIRPQ9GZT3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SLIRPQ9GZT3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.25■□□□□ 0.67
SLIRPQ9GZT3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLIRPQ9GZT3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLIRPQ9GZT3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLIRPQ9GZT3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.24■□□□□ 0.67
SLIRPQ9GZT3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.24■□□□□ 0.67
SLIRPQ9GZT3 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLIRPQ9GZT3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLIRPQ9GZT3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SLIRPQ9GZT3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLIRPQ9GZT3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLIRPQ9GZT3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLIRPQ9GZT3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLIRPQ9GZT3 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLIRPQ9GZT3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLIRPQ9GZT3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLIRPQ9GZT3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLIRPQ9GZT3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLIRPQ9GZT3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SLIRPQ9GZT3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLIRPQ9GZT3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.23■□□□□ 0.67
SLIRPQ9GZT3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLIRPQ9GZT3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLIRPQ9GZT3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLIRPQ9GZT3 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.23■□□□□ 0.67
SLIRPQ9GZT3 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.23■□□□□ 0.67
SLIRPQ9GZT3 AC092296.2-201ENST00000589470 999 ntBASIC19.23■□□□□ 0.67
SLIRPQ9GZT3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLIRPQ9GZT3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLIRPQ9GZT3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SLIRPQ9GZT3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLIRPQ9GZT3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.22■□□□□ 0.67
SLIRPQ9GZT3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SLIRPQ9GZT3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SLIRPQ9GZT3 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
SLIRPQ9GZT3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLIRPQ9GZT3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLIRPQ9GZT3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.22■□□□□ 0.67
SLIRPQ9GZT3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.22■□□□□ 0.67
SLIRPQ9GZT3 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLIRPQ9GZT3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLIRPQ9GZT3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.22■□□□□ 0.67
SLIRPQ9GZT3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLIRPQ9GZT3 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.22■□□□□ 0.67
SLIRPQ9GZT3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.22■□□□□ 0.67
SLIRPQ9GZT3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLIRPQ9GZT3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SLIRPQ9GZT3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.21■□□□□ 0.67
SLIRPQ9GZT3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLIRPQ9GZT3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLIRPQ9GZT3 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLIRPQ9GZT3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLIRPQ9GZT3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLIRPQ9GZT3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
SLIRPQ9GZT3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLIRPQ9GZT3 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLIRPQ9GZT3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SLIRPQ9GZT3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.21■□□□□ 0.67
SLIRPQ9GZT3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.21■□□□□ 0.67
SLIRPQ9GZT3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
SLIRPQ9GZT3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLIRPQ9GZT3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SLIRPQ9GZT3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLIRPQ9GZT3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLIRPQ9GZT3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLIRPQ9GZT3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLIRPQ9GZT3 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLIRPQ9GZT3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLIRPQ9GZT3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLIRPQ9GZT3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLIRPQ9GZT3 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLIRPQ9GZT3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.2■□□□□ 0.66
SLIRPQ9GZT3 AC026202.3-201ENST00000600805 1127 ntBASIC19.2■□□□□ 0.66
SLIRPQ9GZT3 RAP2CP1-202ENST00000605179 643 ntBASIC19.2■□□□□ 0.66
SLIRPQ9GZT3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SLIRPQ9GZT3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLIRPQ9GZT3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLIRPQ9GZT3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLIRPQ9GZT3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.2■□□□□ 0.66
SLIRPQ9GZT3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLIRPQ9GZT3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms