Protein–RNA interactions for Protein: Q9GZQ8

MAP1LC3B, Microtubule-associated proteins 1A/1B light chain 3B, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3BQ9GZQ8 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
MAP1LC3BQ9GZQ8 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
MAP1LC3BQ9GZQ8 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
MAP1LC3BQ9GZQ8 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.22■□□□□ 0.35
MAP1LC3BQ9GZQ8 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
MAP1LC3BQ9GZQ8 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MAP1LC3BQ9GZQ8 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.21■□□□□ 0.35
MAP1LC3BQ9GZQ8 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MAP1LC3BQ9GZQ8 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
MAP1LC3BQ9GZQ8 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MAP1LC3BQ9GZQ8 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
MAP1LC3BQ9GZQ8 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.21■□□□□ 0.35
MAP1LC3BQ9GZQ8 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.21■□□□□ 0.35
MAP1LC3BQ9GZQ8 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MAP1LC3BQ9GZQ8 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
MAP1LC3BQ9GZQ8 TPT1-202ENST00000379055 948 ntTSL 2 BASIC17.21■□□□□ 0.35
MAP1LC3BQ9GZQ8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC17.21■□□□□ 0.35
MAP1LC3BQ9GZQ8 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
MAP1LC3BQ9GZQ8 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.21■□□□□ 0.35
MAP1LC3BQ9GZQ8 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
MAP1LC3BQ9GZQ8 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MAP1LC3BQ9GZQ8 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
MAP1LC3BQ9GZQ8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
MAP1LC3BQ9GZQ8 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MAP1LC3BQ9GZQ8 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.2■□□□□ 0.34
MAP1LC3BQ9GZQ8 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MAP1LC3BQ9GZQ8 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MAP1LC3BQ9GZQ8 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MAP1LC3BQ9GZQ8 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.2■□□□□ 0.34
MAP1LC3BQ9GZQ8 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
MAP1LC3BQ9GZQ8 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MAP1LC3BQ9GZQ8 HES4-204ENST00000484667 667 ntTSL 3 BASIC17.2■□□□□ 0.34
MAP1LC3BQ9GZQ8 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC17.2■□□□□ 0.34
MAP1LC3BQ9GZQ8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
MAP1LC3BQ9GZQ8 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MAP1LC3BQ9GZQ8 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MAP1LC3BQ9GZQ8 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MAP1LC3BQ9GZQ8 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
MAP1LC3BQ9GZQ8 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MAP1LC3BQ9GZQ8 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MAP1LC3BQ9GZQ8 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MAP1LC3BQ9GZQ8 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MAP1LC3BQ9GZQ8 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
MAP1LC3BQ9GZQ8 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.19■□□□□ 0.34
MAP1LC3BQ9GZQ8 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
MAP1LC3BQ9GZQ8 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.19■□□□□ 0.34
MAP1LC3BQ9GZQ8 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
MAP1LC3BQ9GZQ8 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MAP1LC3BQ9GZQ8 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
MAP1LC3BQ9GZQ8 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MAP1LC3BQ9GZQ8 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
MAP1LC3BQ9GZQ8 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC17.19■□□□□ 0.34
MAP1LC3BQ9GZQ8 AC016575.1-201ENST00000607026 382 ntBASIC17.19■□□□□ 0.34
MAP1LC3BQ9GZQ8 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MAP1LC3BQ9GZQ8 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.19■□□□□ 0.34
MAP1LC3BQ9GZQ8 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
MAP1LC3BQ9GZQ8 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
MAP1LC3BQ9GZQ8 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
MAP1LC3BQ9GZQ8 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.19■□□□□ 0.34
MAP1LC3BQ9GZQ8 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MAP1LC3BQ9GZQ8 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
MAP1LC3BQ9GZQ8 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
MAP1LC3BQ9GZQ8 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MAP1LC3BQ9GZQ8 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MAP1LC3BQ9GZQ8 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MAP1LC3BQ9GZQ8 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
MAP1LC3BQ9GZQ8 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
MAP1LC3BQ9GZQ8 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MAP1LC3BQ9GZQ8 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
MAP1LC3BQ9GZQ8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
MAP1LC3BQ9GZQ8 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
MAP1LC3BQ9GZQ8 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
MAP1LC3BQ9GZQ8 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.18■□□□□ 0.34
MAP1LC3BQ9GZQ8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.17■□□□□ 0.34
MAP1LC3BQ9GZQ8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
MAP1LC3BQ9GZQ8 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MAP1LC3BQ9GZQ8 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.17■□□□□ 0.34
MAP1LC3BQ9GZQ8 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC17.17■□□□□ 0.34
MAP1LC3BQ9GZQ8 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MAP1LC3BQ9GZQ8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MAP1LC3BQ9GZQ8 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.17■□□□□ 0.34
MAP1LC3BQ9GZQ8 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MAP1LC3BQ9GZQ8 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
MAP1LC3BQ9GZQ8 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MAP1LC3BQ9GZQ8 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MAP1LC3BQ9GZQ8 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MAP1LC3BQ9GZQ8 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MAP1LC3BQ9GZQ8 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
MAP1LC3BQ9GZQ8 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
MAP1LC3BQ9GZQ8 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.17■□□□□ 0.34
MAP1LC3BQ9GZQ8 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MAP1LC3BQ9GZQ8 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.17■□□□□ 0.34
MAP1LC3BQ9GZQ8 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
MAP1LC3BQ9GZQ8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
MAP1LC3BQ9GZQ8 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
MAP1LC3BQ9GZQ8 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MAP1LC3BQ9GZQ8 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MAP1LC3BQ9GZQ8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
MAP1LC3BQ9GZQ8 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.16■□□□□ 0.34
MAP1LC3BQ9GZQ8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms