Protein–RNA interactions for Protein: Q96AK3

APOBEC3D, DNA dC->dU-editing enzyme APOBEC-3D, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3DQ96AK3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
APOBEC3DQ96AK3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
APOBEC3DQ96AK3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.62
APOBEC3DQ96AK3 ECEL1P1-201ENST00000373592 1742 ntBASIC18.89■□□□□ 0.61
APOBEC3DQ96AK3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
APOBEC3DQ96AK3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.89■□□□□ 0.61
APOBEC3DQ96AK3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
APOBEC3DQ96AK3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
APOBEC3DQ96AK3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.89■□□□□ 0.61
APOBEC3DQ96AK3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.89■□□□□ 0.61
APOBEC3DQ96AK3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
APOBEC3DQ96AK3 AC135279.3-201ENST00000610945 1311 ntBASIC18.89■□□□□ 0.61
APOBEC3DQ96AK3 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
APOBEC3DQ96AK3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
APOBEC3DQ96AK3 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
APOBEC3DQ96AK3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
APOBEC3DQ96AK3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.89■□□□□ 0.61
APOBEC3DQ96AK3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
APOBEC3DQ96AK3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
APOBEC3DQ96AK3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
APOBEC3DQ96AK3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
APOBEC3DQ96AK3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.88■□□□□ 0.61
APOBEC3DQ96AK3 AC096631.2-201ENST00000436136 790 ntBASIC18.88■□□□□ 0.61
APOBEC3DQ96AK3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.88■□□□□ 0.61
APOBEC3DQ96AK3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.88■□□□□ 0.61
APOBEC3DQ96AK3 AC024257.2-201ENST00000549699 147 ntBASIC18.88■□□□□ 0.61
APOBEC3DQ96AK3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.88■□□□□ 0.61
APOBEC3DQ96AK3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.88■□□□□ 0.61
APOBEC3DQ96AK3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
APOBEC3DQ96AK3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.88■□□□□ 0.61
APOBEC3DQ96AK3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
APOBEC3DQ96AK3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
APOBEC3DQ96AK3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
APOBEC3DQ96AK3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
APOBEC3DQ96AK3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
APOBEC3DQ96AK3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
APOBEC3DQ96AK3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
APOBEC3DQ96AK3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
APOBEC3DQ96AK3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
APOBEC3DQ96AK3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
APOBEC3DQ96AK3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
APOBEC3DQ96AK3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
APOBEC3DQ96AK3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
APOBEC3DQ96AK3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
APOBEC3DQ96AK3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.87■□□□□ 0.61
APOBEC3DQ96AK3 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
APOBEC3DQ96AK3 MIR4767-201ENST00000582827 78 ntBASIC18.87■□□□□ 0.61
APOBEC3DQ96AK3 AC010525.1-201ENST00000585559 441 ntBASIC18.87■□□□□ 0.61
APOBEC3DQ96AK3 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
APOBEC3DQ96AK3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.87■□□□□ 0.61
APOBEC3DQ96AK3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.87■□□□□ 0.61
APOBEC3DQ96AK3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
APOBEC3DQ96AK3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
APOBEC3DQ96AK3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APOBEC3DQ96AK3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
APOBEC3DQ96AK3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
APOBEC3DQ96AK3 AC137767.1-201ENST00000602918 1920 ntBASIC18.86■□□□□ 0.61
APOBEC3DQ96AK3 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
APOBEC3DQ96AK3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APOBEC3DQ96AK3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APOBEC3DQ96AK3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
APOBEC3DQ96AK3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
APOBEC3DQ96AK3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.86■□□□□ 0.61
APOBEC3DQ96AK3 SLC47A1P1-202ENST00000449666 945 ntBASIC18.86■□□□□ 0.61
APOBEC3DQ96AK3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
APOBEC3DQ96AK3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APOBEC3DQ96AK3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APOBEC3DQ96AK3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.86■□□□□ 0.61
APOBEC3DQ96AK3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APOBEC3DQ96AK3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APOBEC3DQ96AK3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
APOBEC3DQ96AK3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
APOBEC3DQ96AK3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APOBEC3DQ96AK3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
APOBEC3DQ96AK3 AC080038.3-201ENST00000623346 1952 ntBASIC18.85■□□□□ 0.61
APOBEC3DQ96AK3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APOBEC3DQ96AK3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.85■□□□□ 0.61
APOBEC3DQ96AK3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.85■□□□□ 0.61
APOBEC3DQ96AK3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.85■□□□□ 0.61
APOBEC3DQ96AK3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
APOBEC3DQ96AK3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
APOBEC3DQ96AK3 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
APOBEC3DQ96AK3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
APOBEC3DQ96AK3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
APOBEC3DQ96AK3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.84■□□□□ 0.61
APOBEC3DQ96AK3 BX842568.3-201ENST00000418104 571 ntBASIC18.84■□□□□ 0.61
APOBEC3DQ96AK3 PBX2P1-201ENST00000493219 1291 ntBASIC18.84■□□□□ 0.61
APOBEC3DQ96AK3 AP005435.1-201ENST00000529293 1178 ntBASIC18.84■□□□□ 0.61
APOBEC3DQ96AK3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
APOBEC3DQ96AK3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
APOBEC3DQ96AK3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.84■□□□□ 0.61
APOBEC3DQ96AK3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
APOBEC3DQ96AK3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
APOBEC3DQ96AK3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
APOBEC3DQ96AK3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
APOBEC3DQ96AK3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
APOBEC3DQ96AK3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
APOBEC3DQ96AK3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
APOBEC3DQ96AK3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
APOBEC3DQ96AK3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms