Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBE2E3Q969T4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.97■□□□□ 0.95
UBE2E3Q969T4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
UBE2E3Q969T4 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBE2E3Q969T4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBE2E3Q969T4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
UBE2E3Q969T4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBE2E3Q969T4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.97■□□□□ 0.95
UBE2E3Q969T4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBE2E3Q969T4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.97■□□□□ 0.95
UBE2E3Q969T4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBE2E3Q969T4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
UBE2E3Q969T4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UBE2E3Q969T4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UBE2E3Q969T4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
UBE2E3Q969T4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.96■□□□□ 0.95
UBE2E3Q969T4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBE2E3Q969T4 PKD1P6-201ENST00000343738 4769 ntBASIC20.96■□□□□ 0.95
UBE2E3Q969T4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBE2E3Q969T4 AC137767.1-201ENST00000602918 1920 ntBASIC20.96■□□□□ 0.95
UBE2E3Q969T4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBE2E3Q969T4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBE2E3Q969T4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.96■□□□□ 0.95
UBE2E3Q969T4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
UBE2E3Q969T4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
UBE2E3Q969T4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBE2E3Q969T4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
UBE2E3Q969T4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
UBE2E3Q969T4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
UBE2E3Q969T4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
UBE2E3Q969T4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.95■□□□□ 0.94
UBE2E3Q969T4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
UBE2E3Q969T4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBE2E3Q969T4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
UBE2E3Q969T4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.95■□□□□ 0.94
UBE2E3Q969T4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
UBE2E3Q969T4 AC092053.2-201ENST00000640557 1818 ntBASIC20.94■□□□□ 0.94
UBE2E3Q969T4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBE2E3Q969T4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.94■□□□□ 0.94
UBE2E3Q969T4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBE2E3Q969T4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.94■□□□□ 0.94
UBE2E3Q969T4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.94■□□□□ 0.94
UBE2E3Q969T4 AC080038.3-201ENST00000623346 1952 ntBASIC20.94■□□□□ 0.94
UBE2E3Q969T4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBE2E3Q969T4 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.94■□□□□ 0.94
UBE2E3Q969T4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBE2E3Q969T4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBE2E3Q969T4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBE2E3Q969T4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
UBE2E3Q969T4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
UBE2E3Q969T4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
UBE2E3Q969T4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBE2E3Q969T4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.94■□□□□ 0.94
UBE2E3Q969T4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
UBE2E3Q969T4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
UBE2E3Q969T4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBE2E3Q969T4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBE2E3Q969T4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
UBE2E3Q969T4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBE2E3Q969T4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBE2E3Q969T4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.93■□□□□ 0.94
UBE2E3Q969T4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.93■□□□□ 0.94
UBE2E3Q969T4 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBE2E3Q969T4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBE2E3Q969T4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.93■□□□□ 0.94
UBE2E3Q969T4 UNC93B3-201ENST00000308076 687 ntBASIC20.93■□□□□ 0.94
UBE2E3Q969T4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBE2E3Q969T4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
UBE2E3Q969T4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.93■□□□□ 0.94
UBE2E3Q969T4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.93■□□□□ 0.94
UBE2E3Q969T4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.93■□□□□ 0.94
UBE2E3Q969T4 AC139530.1-201ENST00000575312 1977 ntBASIC20.93■□□□□ 0.94
UBE2E3Q969T4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBE2E3Q969T4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
UBE2E3Q969T4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBE2E3Q969T4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
UBE2E3Q969T4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBE2E3Q969T4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBE2E3Q969T4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBE2E3Q969T4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBE2E3Q969T4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UBE2E3Q969T4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBE2E3Q969T4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBE2E3Q969T4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBE2E3Q969T4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBE2E3Q969T4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
UBE2E3Q969T4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBE2E3Q969T4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBE2E3Q969T4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.92■□□□□ 0.94
UBE2E3Q969T4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBE2E3Q969T4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.92■□□□□ 0.94
UBE2E3Q969T4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
UBE2E3Q969T4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.92■□□□□ 0.94
UBE2E3Q969T4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UBE2E3Q969T4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBE2E3Q969T4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UBE2E3Q969T4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UBE2E3Q969T4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
UBE2E3Q969T4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBE2E3Q969T4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms