Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 RP9P-202ENST00000450133 1212 ntBASIC19.74■□□□□ 0.75
CROCCP3Q8IVE0 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CROCCP3Q8IVE0 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.74■□□□□ 0.75
CROCCP3Q8IVE0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
CROCCP3Q8IVE0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CROCCP3Q8IVE0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CROCCP3Q8IVE0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.73■□□□□ 0.75
CROCCP3Q8IVE0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.73■□□□□ 0.75
CROCCP3Q8IVE0 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
CROCCP3Q8IVE0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CROCCP3Q8IVE0 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.73■□□□□ 0.75
CROCCP3Q8IVE0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CROCCP3Q8IVE0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CROCCP3Q8IVE0 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CROCCP3Q8IVE0 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CROCCP3Q8IVE0 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.73■□□□□ 0.75
CROCCP3Q8IVE0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.73■□□□□ 0.75
CROCCP3Q8IVE0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CROCCP3Q8IVE0 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
CROCCP3Q8IVE0 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.73■□□□□ 0.75
CROCCP3Q8IVE0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CROCCP3Q8IVE0 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CROCCP3Q8IVE0 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CROCCP3Q8IVE0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CROCCP3Q8IVE0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CROCCP3Q8IVE0 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CROCCP3Q8IVE0 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CROCCP3Q8IVE0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.73■□□□□ 0.75
CROCCP3Q8IVE0 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CROCCP3Q8IVE0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.73■□□□□ 0.75
CROCCP3Q8IVE0 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CROCCP3Q8IVE0 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CROCCP3Q8IVE0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CROCCP3Q8IVE0 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.72■□□□□ 0.75
CROCCP3Q8IVE0 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CROCCP3Q8IVE0 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.72■□□□□ 0.75
CROCCP3Q8IVE0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
CROCCP3Q8IVE0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.72■□□□□ 0.75
CROCCP3Q8IVE0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CROCCP3Q8IVE0 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CROCCP3Q8IVE0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CROCCP3Q8IVE0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CROCCP3Q8IVE0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CROCCP3Q8IVE0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.72■□□□□ 0.75
CROCCP3Q8IVE0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CROCCP3Q8IVE0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CROCCP3Q8IVE0 LINC01006-201ENST00000333319 2292 ntBASIC19.72■□□□□ 0.75
CROCCP3Q8IVE0 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CROCCP3Q8IVE0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CROCCP3Q8IVE0 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CROCCP3Q8IVE0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CROCCP3Q8IVE0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CROCCP3Q8IVE0 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CROCCP3Q8IVE0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CROCCP3Q8IVE0 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CROCCP3Q8IVE0 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CROCCP3Q8IVE0 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.71■□□□□ 0.75
CROCCP3Q8IVE0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
CROCCP3Q8IVE0 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
CROCCP3Q8IVE0 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CROCCP3Q8IVE0 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
CROCCP3Q8IVE0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.71■□□□□ 0.75
CROCCP3Q8IVE0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CROCCP3Q8IVE0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CROCCP3Q8IVE0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CROCCP3Q8IVE0 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CROCCP3Q8IVE0 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.71■□□□□ 0.75
CROCCP3Q8IVE0 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CROCCP3Q8IVE0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CROCCP3Q8IVE0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CROCCP3Q8IVE0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CROCCP3Q8IVE0 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.7■□□□□ 0.74
CROCCP3Q8IVE0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CROCCP3Q8IVE0 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CROCCP3Q8IVE0 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.7■□□□□ 0.74
CROCCP3Q8IVE0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.7■□□□□ 0.74
CROCCP3Q8IVE0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CROCCP3Q8IVE0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CROCCP3Q8IVE0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CROCCP3Q8IVE0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CROCCP3Q8IVE0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CROCCP3Q8IVE0 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CROCCP3Q8IVE0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CROCCP3Q8IVE0 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.69■□□□□ 0.74
CROCCP3Q8IVE0 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.69■□□□□ 0.74
CROCCP3Q8IVE0 AC090877.2-201ENST00000558441 1738 ntBASIC19.69■□□□□ 0.74
CROCCP3Q8IVE0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.69■□□□□ 0.74
CROCCP3Q8IVE0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CROCCP3Q8IVE0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CROCCP3Q8IVE0 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CROCCP3Q8IVE0 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CROCCP3Q8IVE0 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CROCCP3Q8IVE0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.68■□□□□ 0.74
CROCCP3Q8IVE0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.68■□□□□ 0.74
CROCCP3Q8IVE0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CROCCP3Q8IVE0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CROCCP3Q8IVE0 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.68■□□□□ 0.74
CROCCP3Q8IVE0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CROCCP3Q8IVE0 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CROCCP3Q8IVE0 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms