Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
CHD1LQ86WJ1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CHD1LQ86WJ1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
CHD1LQ86WJ1 MIR3181-201ENST00000578512 73 ntBASIC27.06■■□□□ 1.92
CHD1LQ86WJ1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC27.06■■□□□ 1.92
CHD1LQ86WJ1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC27.06■■□□□ 1.92
CHD1LQ86WJ1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC27.05■■□□□ 1.92
CHD1LQ86WJ1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
CHD1LQ86WJ1 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CHD1LQ86WJ1 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CHD1LQ86WJ1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC27.05■■□□□ 1.92
CHD1LQ86WJ1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC27.05■■□□□ 1.92
CHD1LQ86WJ1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CHD1LQ86WJ1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC27.05■■□□□ 1.92
CHD1LQ86WJ1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC27.05■■□□□ 1.92
CHD1LQ86WJ1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC27.05■■□□□ 1.92
CHD1LQ86WJ1 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CHD1LQ86WJ1 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CHD1LQ86WJ1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CHD1LQ86WJ1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CHD1LQ86WJ1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CHD1LQ86WJ1 SRD5A1P1-201ENST00000442297 786 ntBASIC27.04■■□□□ 1.92
CHD1LQ86WJ1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC27.04■■□□□ 1.92
CHD1LQ86WJ1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CHD1LQ86WJ1 AL031602.1-201ENST00000633169 911 ntBASIC27.04■■□□□ 1.92
CHD1LQ86WJ1 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CHD1LQ86WJ1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CHD1LQ86WJ1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CHD1LQ86WJ1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
CHD1LQ86WJ1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CHD1LQ86WJ1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CHD1LQ86WJ1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
CHD1LQ86WJ1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CHD1LQ86WJ1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
CHD1LQ86WJ1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CHD1LQ86WJ1 SRR-208ENST00000576848 588 ntTSL 4 BASIC27.03■■□□□ 1.92
CHD1LQ86WJ1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC27.03■■□□□ 1.92
CHD1LQ86WJ1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC27.03■■□□□ 1.92
CHD1LQ86WJ1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CHD1LQ86WJ1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
CHD1LQ86WJ1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CHD1LQ86WJ1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC27.02■■□□□ 1.92
CHD1LQ86WJ1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CHD1LQ86WJ1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
CHD1LQ86WJ1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
CHD1LQ86WJ1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC27.02■■□□□ 1.92
CHD1LQ86WJ1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC27.02■■□□□ 1.92
CHD1LQ86WJ1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC27.02■■□□□ 1.92
CHD1LQ86WJ1 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC27.02■■□□□ 1.92
CHD1LQ86WJ1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC27.02■■□□□ 1.92
CHD1LQ86WJ1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.92
CHD1LQ86WJ1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.92
CHD1LQ86WJ1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC27.01■■□□□ 1.92
CHD1LQ86WJ1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
CHD1LQ86WJ1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
CHD1LQ86WJ1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC27.01■■□□□ 1.91
CHD1LQ86WJ1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC27.01■■□□□ 1.91
CHD1LQ86WJ1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC27.01■■□□□ 1.91
CHD1LQ86WJ1 MIR4466-201ENST00000606121 54 ntBASIC27.01■■□□□ 1.91
CHD1LQ86WJ1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CHD1LQ86WJ1 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CHD1LQ86WJ1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC27■■□□□ 1.91
CHD1LQ86WJ1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC27■■□□□ 1.91
CHD1LQ86WJ1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC27■■□□□ 1.91
CHD1LQ86WJ1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
CHD1LQ86WJ1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC27■■□□□ 1.91
CHD1LQ86WJ1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC27■■□□□ 1.91
CHD1LQ86WJ1 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CHD1LQ86WJ1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CHD1LQ86WJ1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
CHD1LQ86WJ1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC27■■□□□ 1.91
CHD1LQ86WJ1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CHD1LQ86WJ1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC26.99■■□□□ 1.91
CHD1LQ86WJ1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC26.99■■□□□ 1.91
CHD1LQ86WJ1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CHD1LQ86WJ1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC26.99■■□□□ 1.91
CHD1LQ86WJ1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC26.99■■□□□ 1.91
CHD1LQ86WJ1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC26.99■■□□□ 1.91
CHD1LQ86WJ1 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
CHD1LQ86WJ1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.99■■□□□ 1.91
CHD1LQ86WJ1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC26.99■■□□□ 1.91
CHD1LQ86WJ1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC26.99■■□□□ 1.91
CHD1LQ86WJ1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CHD1LQ86WJ1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
CHD1LQ86WJ1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
CHD1LQ86WJ1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CHD1LQ86WJ1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26.98■■□□□ 1.91
CHD1LQ86WJ1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC26.98■■□□□ 1.91
CHD1LQ86WJ1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CHD1LQ86WJ1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC26.98■■□□□ 1.91
CHD1LQ86WJ1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
CHD1LQ86WJ1 FBXW4P1-201ENST00000426721 2239 ntBASIC26.97■■□□□ 1.91
CHD1LQ86WJ1 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CHD1LQ86WJ1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC26.97■■□□□ 1.91
CHD1LQ86WJ1 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
CHD1LQ86WJ1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC26.97■■□□□ 1.91
CHD1LQ86WJ1 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC26.97■■□□□ 1.91
CHD1LQ86WJ1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
CHD1LQ86WJ1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
CHD1LQ86WJ1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms