Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF546Q86UE3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.13■□□□□ 0.49
ZNF546Q86UE3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
ZNF546Q86UE3 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF546Q86UE3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
ZNF546Q86UE3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF546Q86UE3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.12■□□□□ 0.49
ZNF546Q86UE3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.12■□□□□ 0.49
ZNF546Q86UE3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF546Q86UE3 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.12■□□□□ 0.49
ZNF546Q86UE3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
ZNF546Q86UE3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF546Q86UE3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF546Q86UE3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
ZNF546Q86UE3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF546Q86UE3 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF546Q86UE3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF546Q86UE3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF546Q86UE3 AC090877.2-201ENST00000558441 1738 ntBASIC18.12■□□□□ 0.49
ZNF546Q86UE3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ZNF546Q86UE3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF546Q86UE3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
ZNF546Q86UE3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF546Q86UE3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF546Q86UE3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF546Q86UE3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.11■□□□□ 0.49
ZNF546Q86UE3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF546Q86UE3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.11■□□□□ 0.49
ZNF546Q86UE3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.11■□□□□ 0.49
ZNF546Q86UE3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF546Q86UE3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF546Q86UE3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF546Q86UE3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
ZNF546Q86UE3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.1■□□□□ 0.49
ZNF546Q86UE3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
ZNF546Q86UE3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
ZNF546Q86UE3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF546Q86UE3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.09■□□□□ 0.49
ZNF546Q86UE3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF546Q86UE3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF546Q86UE3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF546Q86UE3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF546Q86UE3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF546Q86UE3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF546Q86UE3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ZNF546Q86UE3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF546Q86UE3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF546Q86UE3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF546Q86UE3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF546Q86UE3 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.08■□□□□ 0.49
ZNF546Q86UE3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ZNF546Q86UE3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ZNF546Q86UE3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
ZNF546Q86UE3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF546Q86UE3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.08■□□□□ 0.48
ZNF546Q86UE3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF546Q86UE3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF546Q86UE3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
ZNF546Q86UE3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
ZNF546Q86UE3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
ZNF546Q86UE3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.07■□□□□ 0.48
ZNF546Q86UE3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF546Q86UE3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF546Q86UE3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC18.07■□□□□ 0.48
ZNF546Q86UE3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.07■□□□□ 0.48
ZNF546Q86UE3 AL353803.4-201ENST00000565882 1934 ntBASIC18.07■□□□□ 0.48
ZNF546Q86UE3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ZNF546Q86UE3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.06■□□□□ 0.48
ZNF546Q86UE3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
ZNF546Q86UE3 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.06■□□□□ 0.48
ZNF546Q86UE3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.06■□□□□ 0.48
ZNF546Q86UE3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF546Q86UE3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF546Q86UE3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF546Q86UE3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF546Q86UE3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
ZNF546Q86UE3 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
ZNF546Q86UE3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF546Q86UE3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.06■□□□□ 0.48
ZNF546Q86UE3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF546Q86UE3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF546Q86UE3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.05■□□□□ 0.48
ZNF546Q86UE3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF546Q86UE3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF546Q86UE3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF546Q86UE3 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.05■□□□□ 0.48
ZNF546Q86UE3 AC007029.1-201ENST00000604183 313 ntBASIC18.05■□□□□ 0.48
ZNF546Q86UE3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF546Q86UE3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF546Q86UE3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
ZNF546Q86UE3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.05■□□□□ 0.48
ZNF546Q86UE3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF546Q86UE3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF546Q86UE3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF546Q86UE3 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
ZNF546Q86UE3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF546Q86UE3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.04■□□□□ 0.48
ZNF546Q86UE3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.04■□□□□ 0.48
ZNF546Q86UE3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF546Q86UE3 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms