Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC22.82■■□□□ 1.24
PTCRAQ6ISU1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC22.81■■□□□ 1.24
PTCRAQ6ISU1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.81■■□□□ 1.24
PTCRAQ6ISU1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC22.81■■□□□ 1.24
PTCRAQ6ISU1 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PTCRAQ6ISU1 APTR-203ENST00000430801 583 ntTSL 5 BASIC22.81■■□□□ 1.24
PTCRAQ6ISU1 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC22.81■■□□□ 1.24
PTCRAQ6ISU1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PTCRAQ6ISU1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PTCRAQ6ISU1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
PTCRAQ6ISU1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.81■■□□□ 1.24
PTCRAQ6ISU1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PTCRAQ6ISU1 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC22.8■■□□□ 1.24
PTCRAQ6ISU1 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PTCRAQ6ISU1 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PTCRAQ6ISU1 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PTCRAQ6ISU1 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PTCRAQ6ISU1 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PTCRAQ6ISU1 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC22.8■■□□□ 1.24
PTCRAQ6ISU1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.8■■□□□ 1.24
PTCRAQ6ISU1 AP001160.3-201ENST00000601484 763 ntBASIC22.8■■□□□ 1.24
PTCRAQ6ISU1 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PTCRAQ6ISU1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC22.8■■□□□ 1.24
PTCRAQ6ISU1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PTCRAQ6ISU1 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
PTCRAQ6ISU1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PTCRAQ6ISU1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC22.79■■□□□ 1.24
PTCRAQ6ISU1 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PTCRAQ6ISU1 PPP1R14BP2-201ENST00000426284 444 ntBASIC22.79■■□□□ 1.24
PTCRAQ6ISU1 RPS2P4-201ENST00000476944 856 ntBASIC22.79■■□□□ 1.24
PTCRAQ6ISU1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC22.79■■□□□ 1.24
PTCRAQ6ISU1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PTCRAQ6ISU1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
PTCRAQ6ISU1 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PTCRAQ6ISU1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
PTCRAQ6ISU1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PTCRAQ6ISU1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PTCRAQ6ISU1 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PTCRAQ6ISU1 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PTCRAQ6ISU1 MIPEPP3-201ENST00000412105 444 ntBASIC22.78■■□□□ 1.24
PTCRAQ6ISU1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC22.78■■□□□ 1.24
PTCRAQ6ISU1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
PTCRAQ6ISU1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC22.78■■□□□ 1.24
PTCRAQ6ISU1 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC22.78■■□□□ 1.24
PTCRAQ6ISU1 RARRES2P4-201ENST00000514074 484 ntBASIC22.78■■□□□ 1.24
PTCRAQ6ISU1 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
PTCRAQ6ISU1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.78■■□□□ 1.24
PTCRAQ6ISU1 AC004687.1-201ENST00000579003 1625 ntBASIC22.78■■□□□ 1.24
PTCRAQ6ISU1 AC005224.4-201ENST00000583262 1652 ntBASIC22.77■■□□□ 1.24
PTCRAQ6ISU1 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PTCRAQ6ISU1 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
PTCRAQ6ISU1 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PTCRAQ6ISU1 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC22.77■■□□□ 1.24
PTCRAQ6ISU1 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
PTCRAQ6ISU1 AL158047.1-201ENST00000445918 881 ntBASIC22.77■■□□□ 1.24
PTCRAQ6ISU1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC22.77■■□□□ 1.24
PTCRAQ6ISU1 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PTCRAQ6ISU1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PTCRAQ6ISU1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PTCRAQ6ISU1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PTCRAQ6ISU1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
PTCRAQ6ISU1 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.76■■□□□ 1.23
PTCRAQ6ISU1 BAALC-201ENST00000297574 801 ntTSL 3 BASIC22.76■■□□□ 1.23
PTCRAQ6ISU1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC22.76■■□□□ 1.23
PTCRAQ6ISU1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC22.76■■□□□ 1.23
PTCRAQ6ISU1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.76■■□□□ 1.23
PTCRAQ6ISU1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PTCRAQ6ISU1 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PTCRAQ6ISU1 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC22.75■■□□□ 1.23
PTCRAQ6ISU1 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PTCRAQ6ISU1 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PTCRAQ6ISU1 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PTCRAQ6ISU1 AC010536.3-201ENST00000620306 533 ntBASIC22.75■■□□□ 1.23
PTCRAQ6ISU1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
PTCRAQ6ISU1 OXCT2P1-201ENST00000447263 1535 ntBASIC22.75■■□□□ 1.23
PTCRAQ6ISU1 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC22.75■■□□□ 1.23
PTCRAQ6ISU1 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PTCRAQ6ISU1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
PTCRAQ6ISU1 MKRN4P-201ENST00000444706 1521 ntBASIC22.74■■□□□ 1.23
PTCRAQ6ISU1 ESRRAP1-201ENST00000400596 1257 ntBASIC22.74■■□□□ 1.23
PTCRAQ6ISU1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.74■■□□□ 1.23
PTCRAQ6ISU1 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PTCRAQ6ISU1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
PTCRAQ6ISU1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
PTCRAQ6ISU1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PTCRAQ6ISU1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PTCRAQ6ISU1 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
PTCRAQ6ISU1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PTCRAQ6ISU1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC22.73■■□□□ 1.23
PTCRAQ6ISU1 ADM-205ENST00000528544 586 ntTSL 2 BASIC22.73■■□□□ 1.23
PTCRAQ6ISU1 AC142381.4-202ENST00000563973 229 ntBASIC22.73■■□□□ 1.23
PTCRAQ6ISU1 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC22.73■■□□□ 1.23
PTCRAQ6ISU1 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
PTCRAQ6ISU1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.73■■□□□ 1.23
PTCRAQ6ISU1 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.73■■□□□ 1.23
PTCRAQ6ISU1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PTCRAQ6ISU1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
PTCRAQ6ISU1 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PTCRAQ6ISU1 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PTCRAQ6ISU1 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms