Protein–RNA interactions for Protein: Q08949

DDC1, DNA damage checkpoint protein 1, yeastyeast

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DDC1Q08949 RDS1YCR106W 2499 nt3.78□□□□□ -1.8
DDC1Q08949 PUS9YDL036C 1389 nt3.77□□□□□ -1.81
DDC1Q08949 JEN1YKL217W 1851 nt3.77□□□□□ -1.81
DDC1Q08949 IME4YGL192W 1803 nt3.77□□□□□ -1.81
DDC1Q08949 DBP3YGL078C 1572 nt3.77□□□□□ -1.81
DDC1Q08949 KIN3YAR018C 1308 nt3.77□□□□□ -1.81
DDC1Q08949 GAL11YOL051W 3246 nt3.77□□□□□ -1.81
DDC1Q08949 NUS1YDL193W 1128 nt3.77□□□□□ -1.81
DDC1Q08949 MRP13YGR084C 1020 nt3.77□□□□□ -1.81
DDC1Q08949 MBR1YKL093W 1020 nt3.77□□□□□ -1.81
DDC1Q08949 SPC3YLR066W 555 nt3.77□□□□□ -1.81
DDC1Q08949 PEX12YMR026C 1200 nt3.77□□□□□ -1.81
DDC1Q08949 RIB4YOL143C 510 nt3.77□□□□□ -1.81
DDC1Q08949 MPD1YOR288C 957 nt3.77□□□□□ -1.81
DDC1Q08949 YRM1YOR172W 2361 nt3.77□□□□□ -1.81
DDC1Q08949 RIM4YHL024W 2142 nt3.77□□□□□ -1.81
DDC1Q08949 IOC4YMR044W 1428 nt3.77□□□□□ -1.81
DDC1Q08949 PTR3YFR029W 2037 nt3.77□□□□□ -1.81
DDC1Q08949 GCD1YOR260W 1737 nt3.76□□□□□ -1.81
DDC1Q08949 SPT10YJL127C 1923 nt3.76□□□□□ -1.81
DDC1Q08949 PRP11YDL043C 801 nt3.76□□□□□ -1.81
DDC1Q08949 YER076CYER076C 909 nt3.76□□□□□ -1.81
DDC1Q08949 SDS3YIL084C 984 nt3.76□□□□□ -1.81
DDC1Q08949 CDC8YJR057W 651 nt3.76□□□□□ -1.81
DDC1Q08949 YKL071WYKL071W 771 nt3.76□□□□□ -1.81
DDC1Q08949 JLP1YLL057C 1239 nt3.76□□□□□ -1.81
DDC1Q08949 PAM18YLR008C 507 nt3.76□□□□□ -1.81
DDC1Q08949 OSW1YOR255W 837 nt3.76□□□□□ -1.81
DDC1Q08949 RAD17YOR368W 1206 nt3.76□□□□□ -1.81
DDC1Q08949 NOC2YOR206W 2133 nt3.76□□□□□ -1.81
DDC1Q08949 CDC9YDL164C 2268 nt3.75□□□□□ -1.81
DDC1Q08949 IOC2YLR095C 2439 nt3.75□□□□□ -1.81
DDC1Q08949 PEP7YDR323C 1548 nt3.75□□□□□ -1.81
DDC1Q08949 BUD30YDL151C 582 nt3.75□□□□□ -1.81
DDC1Q08949 MCM21YDR318W 1107 nt3.75□□□□□ -1.81
DDC1Q08949 RPB7YDR404C 516 nt3.75□□□□□ -1.81
DDC1Q08949 YGL108CYGL108C 423 nt3.75□□□□□ -1.81
DDC1Q08949 EDC1YGL222C 528 nt3.75□□□□□ -1.81
DDC1Q08949 YGR051CYGR051C 324 nt3.75□□□□□ -1.81
DDC1Q08949 AIM22YJL046W 1230 nt3.75□□□□□ -1.81
DDC1Q08949 MSA2YKR077W 1092 nt3.75□□□□□ -1.81
DDC1Q08949 snR34snR34 203 nt3.75□□□□□ -1.81
DDC1Q08949 snR37snR37 386 nt3.75□□□□□ -1.81
DDC1Q08949 ALR2YFL050C 2577 nt3.74□□□□□ -1.81
DDC1Q08949 SEG1YMR086W 2883 nt3.74□□□□□ -1.81
DDC1Q08949 MED2YDL005C 1296 nt3.74□□□□□ -1.81
DDC1Q08949 GEP4YHR100C 558 nt3.74□□□□□ -1.81
DDC1Q08949 YAE1YJR067C 426 nt3.74□□□□□ -1.81
DDC1Q08949 YLR225CYLR225C 1224 nt3.74□□□□□ -1.81
DDC1Q08949 VPS28YPL065W 729 nt3.74□□□□□ -1.81
DDC1Q08949 RKM3YBR030W 1659 nt3.74□□□□□ -1.81
DDC1Q08949 FLO10YKR102W 3510 nt3.74□□□□□ -1.81
DDC1Q08949 LRG1YDL240W 3054 nt3.74□□□□□ -1.81
DDC1Q08949 VPS53YJL029C 2469 nt3.73□□□□□ -1.81
DDC1Q08949 PHO13YDL236W 939 nt3.73□□□□□ -1.81
DDC1Q08949 YHP1YDR451C 1062 nt3.73□□□□□ -1.81
DDC1Q08949 YFR045WYFR045W 930 nt3.73□□□□□ -1.81
DDC1Q08949 SPO16YHR153C 597 nt3.73□□□□□ -1.81
DDC1Q08949 TTI2YJR136C 1266 nt3.73□□□□□ -1.81
DDC1Q08949 YLR154W-BYLR154W-B 165 nt3.73□□□□□ -1.81
DDC1Q08949 CDA2YLR308W 939 nt3.73□□□□□ -1.81
DDC1Q08949 RNA1YMR235C 1224 nt3.73□□□□□ -1.81
DDC1Q08949 ATG8YBL078C 354 nt3.73□□□□□ -1.81
DDC1Q08949 FES1YBR101C 873 nt3.73□□□□□ -1.81
DDC1Q08949 DER1YBR201W 636 nt3.73□□□□□ -1.81
DDC1Q08949 MIH1YMR036C 1665 nt3.73□□□□□ -1.81
DDC1Q08949 NTH1YDR001C 2256 nt3.73□□□□□ -1.81
DDC1Q08949 CHD1YER164W 4407 nt3.73□□□□□ -1.81
DDC1Q08949 UGA3YDL170W 1587 nt3.72□□□□□ -1.81
DDC1Q08949 YPK3YBR028C 1578 nt3.72□□□□□ -1.81
DDC1Q08949 POL1YNL102W 4407 nt3.72□□□□□ -1.81
DDC1Q08949 RPO31YOR116C 4383 nt3.72□□□□□ -1.81
DDC1Q08949 PUF2YPR042C 3228 nt3.72□□□□□ -1.81
DDC1Q08949 HOM2YDR158W 1098 nt3.72□□□□□ -1.81
DDC1Q08949 YGL063C-AYGL063C-A 150 nt3.72□□□□□ -1.81
DDC1Q08949 YGL101WYGL101W 648 nt3.72□□□□□ -1.81
DDC1Q08949 SFH5YJL145W 885 nt3.72□□□□□ -1.81
DDC1Q08949 MYO3YKL129C 3819 nt3.72□□□□□ -1.81
DDC1Q08949 ECM16YMR128W 3804 nt3.72□□□□□ -1.81
DDC1Q08949 IDH2YOR136W 1110 nt3.72□□□□□ -1.81
DDC1Q08949 OPY1YBR129C 987 nt3.72□□□□□ -1.81
DDC1Q08949 ATG26YLR189C 3597 nt3.72□□□□□ -1.81
DDC1Q08949 NAM2YLR382C 2685 nt3.72□□□□□ -1.81
DDC1Q08949 NAM9YNL137C 1461 nt3.72□□□□□ -1.81
DDC1Q08949 VMA1YDL185W 3216 nt3.72□□□□□ -1.81
DDC1Q08949 MLH2YLR035C 2088 nt3.71□□□□□ -1.82
DDC1Q08949 IRC9YJL142C 393 nt3.71□□□□□ -1.82
DDC1Q08949 GTT2YLL060C 702 nt3.71□□□□□ -1.82
DDC1Q08949 CPR3YML078W 549 nt3.71□□□□□ -1.82
DDC1Q08949 UTP23YOR004W 765 nt3.71□□□□□ -1.82
DDC1Q08949 ECM8YBR076W 1065 nt3.71□□□□□ -1.82
DDC1Q08949 MRPS9YBR146W 837 nt3.71□□□□□ -1.82
DDC1Q08949 TYR1YBR166C 1359 nt3.71□□□□□ -1.82
DDC1Q08949 MSN4YKL062W 1893 nt3.71□□□□□ -1.82
DDC1Q08949 HPR1YDR138W 2259 nt3.7□□□□□ -1.82
DDC1Q08949 APL4YPR029C 2499 nt3.7□□□□□ -1.82
DDC1Q08949 BOI2YER114C 3123 nt3.7□□□□□ -1.82
DDC1Q08949 SLX8YER116C 825 nt3.7□□□□□ -1.82
DDC1Q08949 YGR161W-CYGR161W-C 279 nt3.7□□□□□ -1.82
DDC1Q08949 YHB1YGR234W 1200 nt3.7□□□□□ -1.82
Retrieved 100 of 7,029 protein–RNA pairs in 43.4 ms