Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
UBA52P62987 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UBA52P62987 UNC93B3-201ENST00000308076 687 ntBASIC18.66■□□□□ 0.58
UBA52P62987 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.66■□□□□ 0.58
UBA52P62987 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.66■□□□□ 0.58
UBA52P62987 RARRES2P6-201ENST00000567333 442 ntBASIC18.66■□□□□ 0.58
UBA52P62987 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBA52P62987 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.66■□□□□ 0.58
UBA52P62987 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UBA52P62987 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBA52P62987 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
UBA52P62987 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBA52P62987 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
UBA52P62987 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
UBA52P62987 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBA52P62987 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBA52P62987 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBA52P62987 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBA52P62987 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
UBA52P62987 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
UBA52P62987 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBA52P62987 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
UBA52P62987 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBA52P62987 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBA52P62987 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.65■□□□□ 0.58
UBA52P62987 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBA52P62987 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.65■□□□□ 0.58
UBA52P62987 AL136162.1-201ENST00000607711 1078 ntBASIC18.65■□□□□ 0.58
UBA52P62987 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBA52P62987 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBA52P62987 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.65■□□□□ 0.58
UBA52P62987 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
UBA52P62987 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.65■□□□□ 0.58
UBA52P62987 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.65■□□□□ 0.58
UBA52P62987 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
UBA52P62987 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
UBA52P62987 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
UBA52P62987 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBA52P62987 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.64■□□□□ 0.57
UBA52P62987 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
UBA52P62987 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.64■□□□□ 0.57
UBA52P62987 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.64■□□□□ 0.57
UBA52P62987 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.64■□□□□ 0.57
UBA52P62987 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
UBA52P62987 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBA52P62987 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBA52P62987 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBA52P62987 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.64■□□□□ 0.57
UBA52P62987 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
UBA52P62987 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBA52P62987 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBA52P62987 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBA52P62987 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBA52P62987 SRD5A1P1-201ENST00000442297 786 ntBASIC18.63■□□□□ 0.57
UBA52P62987 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBA52P62987 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
UBA52P62987 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBA52P62987 ESRRAP2-201ENST00000418437 1549 ntBASIC18.63■□□□□ 0.57
UBA52P62987 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.63■□□□□ 0.57
UBA52P62987 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBA52P62987 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
UBA52P62987 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBA52P62987 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
UBA52P62987 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
UBA52P62987 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBA52P62987 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBA52P62987 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBA52P62987 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBA52P62987 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBA52P62987 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBA52P62987 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.62■□□□□ 0.57
UBA52P62987 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
UBA52P62987 AC135279.3-201ENST00000610945 1311 ntBASIC18.62■□□□□ 0.57
UBA52P62987 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBA52P62987 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBA52P62987 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBA52P62987 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
UBA52P62987 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
UBA52P62987 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
UBA52P62987 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UBA52P62987 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
UBA52P62987 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
UBA52P62987 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
UBA52P62987 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UBA52P62987 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBA52P62987 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBA52P62987 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBA52P62987 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
UBA52P62987 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.61■□□□□ 0.57
UBA52P62987 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBA52P62987 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBA52P62987 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
UBA52P62987 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.61■□□□□ 0.57
UBA52P62987 AL031432.3-201ENST00000607698 485 ntBASIC18.61■□□□□ 0.57
UBA52P62987 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.61■□□□□ 0.57
UBA52P62987 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
UBA52P62987 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBA52P62987 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBA52P62987 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
UBA52P62987 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms