Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DEFA3P59666 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DEFA3P59666 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.16■□□□□ 0.66
DEFA3P59666 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.16■□□□□ 0.66
DEFA3P59666 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.16■□□□□ 0.66
DEFA3P59666 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.16■□□□□ 0.66
DEFA3P59666 AC136428.2-201ENST00000563187 214 ntBASIC19.16■□□□□ 0.66
DEFA3P59666 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.16■□□□□ 0.66
DEFA3P59666 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DEFA3P59666 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
DEFA3P59666 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DEFA3P59666 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DEFA3P59666 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DEFA3P59666 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.15■□□□□ 0.66
DEFA3P59666 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DEFA3P59666 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DEFA3P59666 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DEFA3P59666 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DEFA3P59666 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DEFA3P59666 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DEFA3P59666 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.15■□□□□ 0.66
DEFA3P59666 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.15■□□□□ 0.66
DEFA3P59666 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
DEFA3P59666 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
DEFA3P59666 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.14■□□□□ 0.65
DEFA3P59666 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
DEFA3P59666 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.14■□□□□ 0.65
DEFA3P59666 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.14■□□□□ 0.65
DEFA3P59666 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.14■□□□□ 0.65
DEFA3P59666 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DEFA3P59666 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DEFA3P59666 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.14■□□□□ 0.65
DEFA3P59666 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
DEFA3P59666 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
DEFA3P59666 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DEFA3P59666 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DEFA3P59666 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
DEFA3P59666 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.13■□□□□ 0.65
DEFA3P59666 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DEFA3P59666 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DEFA3P59666 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
DEFA3P59666 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DEFA3P59666 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.13■□□□□ 0.65
DEFA3P59666 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DEFA3P59666 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DEFA3P59666 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.13■□□□□ 0.65
DEFA3P59666 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DEFA3P59666 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DEFA3P59666 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DEFA3P59666 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.13■□□□□ 0.65
DEFA3P59666 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DEFA3P59666 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DEFA3P59666 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DEFA3P59666 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DEFA3P59666 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
DEFA3P59666 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DEFA3P59666 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DEFA3P59666 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.12■□□□□ 0.65
DEFA3P59666 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
DEFA3P59666 AC126177.7-201ENST00000547904 679 ntBASIC19.12■□□□□ 0.65
DEFA3P59666 AC097358.2-201ENST00000607541 1159 ntBASIC19.12■□□□□ 0.65
DEFA3P59666 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
DEFA3P59666 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
DEFA3P59666 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DEFA3P59666 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DEFA3P59666 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DEFA3P59666 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
DEFA3P59666 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.12■□□□□ 0.65
DEFA3P59666 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.11■□□□□ 0.65
DEFA3P59666 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
DEFA3P59666 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DEFA3P59666 LINC01006-201ENST00000333319 2292 ntBASIC19.11■□□□□ 0.65
DEFA3P59666 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DEFA3P59666 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
DEFA3P59666 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DEFA3P59666 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
DEFA3P59666 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
DEFA3P59666 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
DEFA3P59666 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DEFA3P59666 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DEFA3P59666 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.11■□□□□ 0.65
DEFA3P59666 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.1■□□□□ 0.65
DEFA3P59666 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
DEFA3P59666 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
DEFA3P59666 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DEFA3P59666 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
DEFA3P59666 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
DEFA3P59666 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DEFA3P59666 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.1■□□□□ 0.65
DEFA3P59666 SUZ12P1-203ENST00000578195 985 ntBASIC19.1■□□□□ 0.65
DEFA3P59666 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
DEFA3P59666 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
DEFA3P59666 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
DEFA3P59666 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.1■□□□□ 0.65
DEFA3P59666 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.09■□□□□ 0.65
DEFA3P59666 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
DEFA3P59666 AC087742.1-201ENST00000575880 1738 ntBASIC19.09■□□□□ 0.65
DEFA3P59666 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.09■□□□□ 0.65
DEFA3P59666 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.09■□□□□ 0.65
DEFA3P59666 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms