Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.13■□□□□ 0.65
ATF1P18846 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ATF1P18846 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATF1P18846 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATF1P18846 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATF1P18846 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
ATF1P18846 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATF1P18846 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATF1P18846 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.12■□□□□ 0.65
ATF1P18846 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATF1P18846 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATF1P18846 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATF1P18846 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATF1P18846 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
ATF1P18846 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.12■□□□□ 0.65
ATF1P18846 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.12■□□□□ 0.65
ATF1P18846 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.12■□□□□ 0.65
ATF1P18846 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.12■□□□□ 0.65
ATF1P18846 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
ATF1P18846 AC073130.3-201ENST00000624389 2278 ntBASIC19.12■□□□□ 0.65
ATF1P18846 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ATF1P18846 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.11■□□□□ 0.65
ATF1P18846 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATF1P18846 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATF1P18846 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATF1P18846 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.11■□□□□ 0.65
ATF1P18846 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
ATF1P18846 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ATF1P18846 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ATF1P18846 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATF1P18846 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
ATF1P18846 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
ATF1P18846 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.1■□□□□ 0.65
ATF1P18846 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.1■□□□□ 0.65
ATF1P18846 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATF1P18846 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATF1P18846 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.1■□□□□ 0.65
ATF1P18846 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATF1P18846 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.1■□□□□ 0.65
ATF1P18846 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
ATF1P18846 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATF1P18846 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.1■□□□□ 0.65
ATF1P18846 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ATF1P18846 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.09■□□□□ 0.65
ATF1P18846 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATF1P18846 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
ATF1P18846 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATF1P18846 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.09■□□□□ 0.65
ATF1P18846 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ATF1P18846 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.09■□□□□ 0.65
ATF1P18846 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATF1P18846 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.09■□□□□ 0.65
ATF1P18846 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATF1P18846 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATF1P18846 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATF1P18846 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.08■□□□□ 0.65
ATF1P18846 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ATF1P18846 FP325331.1-202ENST00000623531 1380 ntBASIC19.08■□□□□ 0.65
ATF1P18846 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ATF1P18846 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ATF1P18846 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.08■□□□□ 0.65
ATF1P18846 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ATF1P18846 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.08■□□□□ 0.65
ATF1P18846 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATF1P18846 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ATF1P18846 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.08■□□□□ 0.64
ATF1P18846 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
ATF1P18846 LINC01529-204ENST00000636474 1715 ntBASIC19.08■□□□□ 0.64
ATF1P18846 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATF1P18846 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATF1P18846 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATF1P18846 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATF1P18846 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATF1P18846 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
ATF1P18846 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATF1P18846 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATF1P18846 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATF1P18846 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATF1P18846 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATF1P18846 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATF1P18846 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.07■□□□□ 0.64
ATF1P18846 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ATF1P18846 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.07■□□□□ 0.64
ATF1P18846 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.07■□□□□ 0.64
ATF1P18846 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
ATF1P18846 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATF1P18846 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
ATF1P18846 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.07■□□□□ 0.64
ATF1P18846 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATF1P18846 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATF1P18846 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATF1P18846 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATF1P18846 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.06■□□□□ 0.64
ATF1P18846 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATF1P18846 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ATF1P18846 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
ATF1P18846 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.06■□□□□ 0.64
ATF1P18846 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.06■□□□□ 0.64
ATF1P18846 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.06■□□□□ 0.64
ATF1P18846 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms